RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 TMEM266Q2M3C6 531 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 MARCH8Q5T0T0 291 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 ARL6IP4Q66PJ3 421 aaKnown RBP14.74□□□□□ -0.05
TMEM258-202ENST00000535042 CKAP2LQ8IYA6 745 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 LMBR1Q8WVP7 490 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 TRAPPC12Q8WVT3 735 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 ATP6V0A1Q93050 837 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 ZNF396Q96N95 335 aaPredicted RBP14.74□□□□□ -0.05
TMEM258-202ENST00000535042 PDLIM7Q9NR12 457 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 CEP131Q9UPN4 1083 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 ALPK3Q96L96 1907 aa14.74□□□□□ -0.05
TMEM258-202ENST00000535042 MROH7Q68CQ1 1323 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 NRCAMQ92823 1304 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 A0A087WWV3 80 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 TRIM43BA6NCK2 446 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 ZBTB42B2RXF5 422 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 ZBTB39O15060 712 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 TREHO43280 583 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 HBP1O60381 514 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 OATP04181 439 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 CLTBP09497 229 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 IGBP1P78318 339 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 NUCB2P80303 420 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 SLC39A14Q15043 492 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 PTGISQ16647 500 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 CATSPER3Q86XQ3 398 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 TPH2Q8IWU9 490 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 LINC00301Q8NCQ3 95 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 BBXQ8WY36 941 aaPredicted RBP14.73□□□□□ -0.05
TMEM258-202ENST00000535042 DHX38Q92620 1227 aaKnown RBP14.73□□□□□ -0.05
TMEM258-202ENST00000535042 WNT8BQ93098 351 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 TRIM43Q96BQ3 446 aaPredicted RBP14.73□□□□□ -0.05
TMEM258-202ENST00000535042 LXNQ9BS40 222 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 LRWD1Q9UFC0 647 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 FBXO2Q9UK22 296 aaPredicted RBP14.73□□□□□ -0.05
TMEM258-202ENST00000535042 TBX21Q9UL17 535 aa14.73□□□□□ -0.05
TMEM258-202ENST00000535042 RBAK-RBAKDNI3L0D1 243 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 TLR3O15455 904 aaKnown RBP14.72□□□□□ -0.05
TMEM258-202ENST00000535042 SYN1P17600 705 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 ITGB8P26012 769 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 ECM1Q16610 540 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 XKR3Q5GH77 459 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 ANO5Q75V66 913 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 C4orf19Q8IY42 314 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 SH2D3AQ9BRG2 576 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 MMTAG2Q9BU76 263 aaKnown RBP14.72□□□□□ -0.05
TMEM258-202ENST00000535042 POLR3CQ9BUI4 534 aaPredicted RBP14.72□□□□□ -0.05
TMEM258-202ENST00000535042 ZSWIM4Q9H7M6 989 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 TMEM39AQ9NV64 488 aa14.72□□□□□ -0.05
TMEM258-202ENST00000535042 ZMYND8Q9ULU4 1186 aaPredicted RBP14.72□□□□□ -0.05
TMEM258-202ENST00000535042 MORC2Q9Y6X9 1032 aaPredicted RBP14.72□□□□□ -0.05
TMEM258-202ENST00000535042 UMODL1Q5DID0 1318 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 MBLAC1A4D2B0 266 aaPredicted RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 RRN3P2A6NIE6 340 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 DDX11L8A8MPP1 907 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 KIAA0355O15063 1070 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 LYPLA2O95372 231 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 RPA1P27694 616 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 STK38Q15208 465 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 TARBP2Q15633 366 aaKnown RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 TRIM71Q2Q1W2 868 aaKnown RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 ZNF484Q5JVG2 852 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 PLA2G4FQ68DD2 849 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 RUFY4Q6ZNE9 571 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 SERINC5Q86VE9 423 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 NEK9Q8TD19 979 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 FAM167AQ96KS9 214 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 CLIC6Q96NY7 704 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 CEP89Q96ST8 783 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 NIFKQ9BYG3 293 aaKnown RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 TUFT1Q9NNX1 390 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 NRBP2Q9NSY0 501 aa14.71□□□□□ -0.05
TMEM258-202ENST00000535042 SEPT9Q9UHD8 586 aaPredicted RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 SRPRBQ9Y5M8 271 aaKnown RBP14.71□□□□□ -0.05
TMEM258-202ENST00000535042 SPTLC2O15270 562 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 DKC1O60832 514 aaKnown RBP eCLIP14.7□□□□□ -0.06
TMEM258-202ENST00000535042 YEATS4O95619 227 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 GNAT1P11488 350 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 KLRC1P26715 233 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 CCT6AP40227 531 aaKnown RBP14.7□□□□□ -0.06
TMEM258-202ENST00000535042 NPEPPSP55786 919 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 PTK7Q13308 1070 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 MTERF2Q49AM1 385 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 SPECC1Q5M775 1068 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 ATL3Q6DD88 541 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 POTEGQ6S5H5 508 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 MTHFD1LQ6UB35 978 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 USP49Q70CQ1 688 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 ERMNQ8TAM6 284 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 SNX29Q8TEQ0 813 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 TNPO1Q92973 898 aaKnown RBP14.7□□□□□ -0.06
TMEM258-202ENST00000535042 IPO9Q96P70 1041 aaKnown RBP14.7□□□□□ -0.06
TMEM258-202ENST00000535042 NOC4LQ9BVI4 516 aaKnown RBP14.7□□□□□ -0.06
TMEM258-202ENST00000535042 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 PPP1R12CQ9BZL4 782 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 CSRNP2Q9H175 543 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 TUBE1Q9UJT0 475 aa14.7□□□□□ -0.06
TMEM258-202ENST00000535042 CIZ1Q9ULV3 898 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms