RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 PARD6BQ9BYG5 372 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 TRIM4Q9C037 500 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 EFCC1Q9HA90 598 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 CEP72Q9P209 647 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 TUBE1Q9UJT0 475 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 GMNNO75496 209 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 RASA3Q14644 834 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 EXOC8Q8IYI6 725 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 RSAD2Q8WXG1 361 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 TRIM11Q96F44 468 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 PDS5AQ29RF7 1337 aaKnown RBP18.65■□□□□ 0.58
PHRF1-206ENST00000534320 PGRMC1O00264 195 aaKnown RBP18.65■□□□□ 0.58
PHRF1-206ENST00000534320 ZMYND10O75800 440 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 HSPA1LP34931 641 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 C2orf54Q08AI8 447 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 PDIA5Q14554 519 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 SLC10A5Q5PT55 438 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 MIS12Q9H081 205 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 VPS37BQ9H9H4 285 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 TBC1D22BQ9NU19 505 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
PHRF1-206ENST00000534320 MYO5BQ9ULV0 1848 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 CCDC151A5D8V7 595 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 PFDN1O60925 122 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 KRT15P19012 456 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 DBN1Q16643 649 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 ALKBH5Q6P6C2 394 aaKnown RBP18.65■□□□□ 0.58
PHRF1-206ENST00000534320 CLEC10AQ8IUN9 316 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 SSX2IPQ9Y2D8 614 aa18.65■□□□□ 0.58
PHRF1-206ENST00000534320 PADI6Q6TGC4 694 aa18.64■□□□□ 0.58
PHRF1-206ENST00000534320 SMC1BQ8NDV3 1235 aa18.64■□□□□ 0.58
PHRF1-206ENST00000534320 MAP3K14Q99558 947 aa18.64■□□□□ 0.58
PHRF1-206ENST00000534320 HESX1Q9UBX0 185 aa18.64■□□□□ 0.58
PHRF1-206ENST00000534320 ZHX2Q9Y6X8 837 aa18.64■□□□□ 0.58
PHRF1-206ENST00000534320 GPR75-ASB3A0A0A6YYF3 556 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 GOLGA8IPA6NC78 632 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 GOLGA8JA6NMD2 632 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 USP27XA6NNY8 438 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 HEXIM1O94992 359 aaKnown RBP18.64■□□□□ 0.57
PHRF1-206ENST00000534320 DPF2Q92785 391 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 WRNIP1Q96S55 665 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 FCER1AP12319 257 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 PRPF38AQ8NAV1 312 aaKnown RBP18.64■□□□□ 0.57
PHRF1-206ENST00000534320 STXBP3O00186 592 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 KNOP1Q1ED39 458 aaKnown RBP18.64■□□□□ 0.57
PHRF1-206ENST00000534320 SCYL2Q6P3W7 929 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 USP49Q70CQ1 688 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-206ENST00000534320 SHPRHQ149N8 1683 aa18.64■□□□□ 0.57
PHRF1-206ENST00000534320 THAP12O43422 761 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 ZNF131P52739 623 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 EN1Q05925 392 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-206ENST00000534320 DPYDQ12882 1025 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 ARMC9Q7Z3E5 817 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 MAGOHBQ96A72 148 aaKnown RBP18.63■□□□□ 0.57
PHRF1-206ENST00000534320 EPB41L5Q9HCM4 733 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 AKT3Q9Y243 479 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 PASKQ96RG2 1323 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 LRRC53A6NM62 1247 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 WDR64B1ANS9 1081 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 MAPK4P31152 587 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 MUM1Q2TAK8 710 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 FAM47CQ5HY64 1035 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 SDCCAG8Q86SQ7 713 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-206ENST00000534320 VPS52Q8N1B4 723 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 NEK9Q8TD19 979 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 ANKRD36BP1Q96IX9 119 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 TRIM9Q9C026 710 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 POLD4Q9HCU8 107 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 LRRD1A4D1F6 860 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 TROAPQ12815 778 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 KRT81Q14533 505 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 PROCA1Q8NCQ7 364 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-206ENST00000534320 PBKQ96KB5 322 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 TTC26A0AVF1 554 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 EPHB4P54760 987 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 PPP4CP60510 307 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 FMR1Q06787 632 aaKnown RBP eCLIP18.63■□□□□ 0.575e-9■■■■■ 37.3
PHRF1-206ENST00000534320 KCNH2Q12809 1159 aa18.63■□□□□ 0.57
PHRF1-206ENST00000534320 ZBTB7AO95365 584 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 PDHBP11177 359 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 CLCN6P51797 869 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 APBA1Q02410 837 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 ITIH3Q06033 890 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 SNRNP48Q6IEG0 339 aaKnown RBP18.62■□□□□ 0.57
PHRF1-206ENST00000534320 ENGASEQ8NFI3 743 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 NYAP2Q9P242 653 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 TXNDC9O14530 226 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 RNF8O76064 485 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 SPP2Q13103 211 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 HHATQ5VTY9 493 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 TYW1Q9NV66 732 aaKnown RBP18.62■□□□□ 0.57
PHRF1-206ENST00000534320 GNGT1P63211 74 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 NAALADL2Q58DX5 795 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 RNF146Q9NTX7 359 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 HOXC10Q9NYD6 342 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 IRX4P78413 519 aa18.62■□□□□ 0.57
PHRF1-206ENST00000534320 ADGRG1Q9Y653 693 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms