RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 HSD17B4P51659 736 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SP2Q02086 613 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 MTMR3Q13615 1198 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TAF2Q6P1X5 1199 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 RBM23Q86U06 439 aaKnown RBP10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 RSPH3Q86UC2 560 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TMEM105Q8N8V8 129 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 RASGRP4Q8TDF6 673 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 PDCD2LQ9BRP1 358 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 S1PR5Q9H228 398 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SEMA4AQ9H3S1 761 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 TOMM22Q9NS69 142 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 SETD4Q9NVD3 440 aa10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 ZNF215Q9UL58 517 aaPredicted RBP10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
SOX9-AS1-213ENST00000533996 FAM186AA6NE01 2351 aa10.77□□□□□ -0.68
SOX9-AS1-213ENST00000533996 CCER2I3L3R5 266 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 NOP56O00567 594 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 STAM2O75886 525 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 CFBP00751 764 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 GHRP10912 638 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 MYCLP12524 364 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 HOXB8P17481 243 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 UBA1P22314 1058 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 MGAT3Q09327 533 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 KCNC3Q14003 757 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 NEDD9Q14511 834 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 LPIN1Q14693 890 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 PGM5Q15124 567 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 DUSP6Q16828 381 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 CCDC178Q5BJE1 867 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 RRP12Q5JTH9 1297 aaKnown RBP10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 TSHZ1Q6ZSZ6 1077 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 FRMD5Q7Z6J6 570 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 DGKHQ86XP1 1220 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 NPAS4Q8IUM7 802 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 ADGRF4Q8IZF3 695 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 KREMEN2Q8NCW0 462 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 MICAL1Q8TDZ2 1067 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 PCMTD1Q96MG8 357 aaPredicted RBP10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 UBA5Q9GZZ9 404 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 AAASQ9NRG9 546 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 MYO10Q9HD67 2058 aa10.77□□□□□ -0.69
SOX9-AS1-213ENST00000533996 DDX11L8A8MPP1 907 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 CSPG5O95196 566 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 CD46P15529 392 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 CCND2P30279 289 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 ARHGAP4P98171 946 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 ASPRV1Q53RT3 343 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 DGLUCYQ7Z3D6 616 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 LAPTM4BQ86VI4 370 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 PCDHB12Q9Y5F1 795 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 ZMYM6O95789 1325 aa10.76□□□□□ -0.69
SOX9-AS1-213ENST00000533996 RIF1Q5UIP0 2472 aaKnown RBP10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 RBAK-RBAKDNI3L0D1 243 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 PER2O15055 1255 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 FGAP02671 866 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 GOLGA8HP0CJ92 632 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 TRAF1Q13077 416 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 PUM1Q14671 1186 aaKnown RBP eCLIP10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 QRICH1Q2TAL8 776 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 GNPTABQ3T906 1256 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 METTL7BQ6UX53 244 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 LMBR1Q8WVP7 490 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 GPR20Q99678 358 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 AMNQ9BXJ7 453 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 PCDHGC5Q9Y5F6 944 aa10.75□□□□□ -0.69
SOX9-AS1-213ENST00000533996 FNDC1Q4ZHG4 1894 aaPredicted RBP10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 MED19A0JLT2 244 aaPredicted RBP10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 OPLAHO14841 1288 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 SORBS3O60504 671 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 BRD1O95696 1058 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 TECP42680 631 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 ITIH3Q06033 890 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 MFSD6Q6ZSS7 791 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 TICAM2Q86XR7 235 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 PNMA1Q8ND90 353 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 VN1R2Q8NFZ6 395 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 ESR2Q92731 530 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 MFSD1Q9H3U5 465 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 RNF41Q9H4P4 317 aaPredicted RBP10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 DCTPP1Q9H773 170 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 JMJD4Q9H9V9 463 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 HELLSQ9NRZ9 838 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 LZTS1Q9Y250 596 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 DOCK5Q9H7D0 1870 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 LOXHD1Q8IVV2 1947 aa10.74□□□□□ -0.69
SOX9-AS1-213ENST00000533996 DMXL1Q9Y485 3027 aa10.73□□□□□ -0.69
SOX9-AS1-213ENST00000533996 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
SOX9-AS1-213ENST00000533996 FSCN2O14926 492 aa10.73□□□□□ -0.69
SOX9-AS1-213ENST00000533996 VPS53Q5VIR6 699 aa10.73□□□□□ -0.69
SOX9-AS1-213ENST00000533996 IER5Q5VY09 327 aa10.73□□□□□ -0.69
SOX9-AS1-213ENST00000533996 TSHZ3Q63HK5 1081 aa10.73□□□□□ -0.69
SOX9-AS1-213ENST00000533996 CES5AQ6NT32 575 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms