RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 CD2BP2O95400 341 aaKnown RBP17.85■□□□□ 0.45
TSKU-204ENST00000533752 BAG4O95429 457 aaKnown RBP17.85■□□□□ 0.45
TSKU-204ENST00000533752 IGBP1P78318 339 aa17.85■□□□□ 0.45
TSKU-204ENST00000533752 GUCY1B3Q02153 619 aa17.85■□□□□ 0.45
TSKU-204ENST00000533752 ZNF484Q5JVG2 852 aa17.85■□□□□ 0.45
TSKU-204ENST00000533752 MARCH8Q5T0T0 291 aa17.85■□□□□ 0.45
TSKU-204ENST00000533752 TRAF7Q6Q0C0 670 aa17.85■□□□□ 0.45
TSKU-204ENST00000533752 MIER3Q7Z3K6 550 aa17.85■□□□□ 0.45
TSKU-204ENST00000533752 VWCEQ96DN2 955 aa17.85■□□□□ 0.45
TSKU-204ENST00000533752 FAM205CA6NFA0 338 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 ZBBXA8MT70 800 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 SLC34A2O95436 690 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 ORC2Q13416 577 aaPredicted RBP17.84■□□□□ 0.45
TSKU-204ENST00000533752 CNKSR3Q6P9H4 555 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 B3GNT9Q6UX72 402 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 PCDHA2Q9Y5H9 948 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 SLC4A7Q9Y6M7 1214 aa17.84■□□□□ 0.45
TSKU-204ENST00000533752 SCN5AQ14524 2016 aa17.83■□□□□ 0.45
TSKU-204ENST00000533752 TMEM265A0A087WTH1 108 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 NEMFO60524 1076 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 NBNO60934 754 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 CTSHP09668 335 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 PRKCEQ02156 737 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 FAM26DQ5JW98 314 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 FAM109BQ6ICB4 259 aaPredicted RBP17.83■□□□□ 0.44
TSKU-204ENST00000533752 RUFY4Q6ZNE9 571 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 GJA10Q969M2 543 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 SLC9A7Q96T83 725 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 VAV3Q9UKW4 847 aa17.83■□□□□ 0.44
TSKU-204ENST00000533752 SMIM35A0A1B0GVV1 85 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 M0QZ92 97 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 DKC1O60832 514 aaKnown RBP eCLIP17.82■□□□□ 0.44
TSKU-204ENST00000533752 OATP04181 439 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 KCNJ6P48051 423 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 TRAPPC10P48553 1259 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 MBTPS1Q14703 1052 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 CALCRLQ16602 461 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 MTHFD1LQ6UB35 978 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 NOSTRINQ8IVI9 506 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 NME8Q8N427 588 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 NRBP2Q9NSY0 501 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 CXXC1Q9P0U4 656 aaPredicted RBP17.82■□□□□ 0.44
TSKU-204ENST00000533752 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
TSKU-204ENST00000533752 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
TSKU-204ENST00000533752 MYH9P35579 1960 aaKnown RBP17.82■□□□□ 0.44
TSKU-204ENST00000533752 ABHD14A-ACY1A0A1B0GW23 586 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 ATP2A2P16615 1042 aaKnown RBP17.81■□□□□ 0.44
TSKU-204ENST00000533752 ATP4AP20648 1035 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 MRPS6P82932 125 aaKnown RBP17.81■□□□□ 0.44
TSKU-204ENST00000533752 GPNMBQ14956 572 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 RAB30Q15771 203 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 ZNF697Q5TEC3 545 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 IER5Q5VY09 327 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 PHOSPHO2Q8TCD6 241 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 TRAPPC12Q8WVT3 735 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 DNAJB3Q8WWF6 145 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 HAS1Q92839 578 aa17.81■□□□□ 0.44
TSKU-204ENST00000533752 FAM49AQ9H0Q0 323 aaPredicted RBP17.81■□□□□ 0.44
TSKU-204ENST00000533752 MAGEB2O15479 319 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 ZNF862O60290 1169 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.44
TSKU-204ENST00000533752 KLRC1P26715 233 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 GJB2P29033 226 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 PSMC5P62195 406 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 IKBKEQ14164 716 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 PLEKHG4Q58EX7 1191 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 XKR3Q5GH77 459 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 SEPT8Q92599 483 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 APBB2Q92870 758 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 MSRAQ9UJ68 235 aa17.8■□□□□ 0.44
TSKU-204ENST00000533752 SZT2Q5T011 3432 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 ZBTB42B2RXF5 422 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 H3BQV1 296 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 C22orf31O95567 290 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 CHRNA1P02708 482 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 DNAJB2P25686 324 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 MGAT3Q09327 533 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 UGCGQ16739 394 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 ZNF710Q8N1W2 664 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 DEFB123Q8N688 67 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 USP38Q8NB14 1042 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 TET1Q8NFU7 2136 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 CDY2AQ9Y6F7 541 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 SQORQ9Y6N5 450 aa17.79■□□□□ 0.44
TSKU-204ENST00000533752 LAMA2P24043 3122 aaKnown RBP17.78■□□□□ 0.44
TSKU-204ENST00000533752 P4HBP07237 508 aaKnown RBP17.78■□□□□ 0.44
TSKU-204ENST00000533752 TMOD1P28289 359 aa17.78■□□□□ 0.44
TSKU-204ENST00000533752 MCM7P33993 719 aa17.78■□□□□ 0.44
TSKU-204ENST00000533752 QARSP47897 775 aaKnown RBP17.78■□□□□ 0.44
TSKU-204ENST00000533752 WDR5P61964 334 aaKnown RBP17.78■□□□□ 0.44
TSKU-204ENST00000533752 CUL4AQ13619 759 aa17.78■□□□□ 0.44
TSKU-204ENST00000533752 EPHA7Q15375 998 aa17.78■□□□□ 0.44
TSKU-204ENST00000533752 TTC38Q5R3I4 469 aa17.78■□□□□ 0.44
TSKU-204ENST00000533752 FAM43BQ6ZT52 329 aaPredicted RBP17.78■□□□□ 0.44
TSKU-204ENST00000533752 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
TSKU-204ENST00000533752 NEK9Q8TD19 979 aa17.78■□□□□ 0.44
TSKU-204ENST00000533752 TIFAQ96CG3 184 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms