RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 DZANK1Q9NVP4 752 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 NYAP2Q9P242 653 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 TMX2Q9Y320 296 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 LOC285556D6RIA3 1793 aa8.96□□□□□ -0.98
CASP4-212ENST00000533730 PTPRFP10586 1907 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 IGKV6D-41A0A0C4DH26 115 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 METTL12A8MUP2 240 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 RANBP6O60518 1105 aaKnown RBP8.95□□□□□ -0.98
CASP4-212ENST00000533730 TLR2O60603 784 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 PRDM1O75626 825 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 TBC1D8O95759 1140 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 TTLL1O95922 423 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 F13A1P00488 732 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 EEF2P13639 858 aaKnown RBP8.95□□□□□ -0.98
CASP4-212ENST00000533730 HOXA7P31268 230 aaPredicted RBP8.95□□□□□ -0.98
CASP4-212ENST00000533730 SOX18P35713 384 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 ADH7P40394 386 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 LBX1P52954 281 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 HAND2P61296 217 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 IRX3P78415 501 aaPredicted RBP8.95□□□□□ -0.98
CASP4-212ENST00000533730 TFAP4Q01664 338 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 IFRD2Q12894 506 aaPredicted RBP8.95□□□□□ -0.98
CASP4-212ENST00000533730 ARHGEF6Q15052 776 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 SPRED3Q2MJR0 410 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 PLEKHG6Q3KR16 790 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 CCDC178Q5BJE1 867 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 FBXW10Q5XX13 1052 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 BNC2Q6ZN30 1099 aaPredicted RBP8.95□□□□□ -0.98
CASP4-212ENST00000533730 HOMER1Q86YM7 354 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 ESR2Q92731 530 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 PLD4Q96BZ4 506 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 KRT23Q9C075 422 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 IL25Q9H293 177 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 ZFYVE1Q9HBF4 777 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 DNAJB12Q9NXW2 375 aaKnown RBP8.95□□□□□ -0.98
CASP4-212ENST00000533730 ACTR10Q9NZ32 417 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 STK17AQ9UEE5 414 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 STARD13Q9Y3M8 1113 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 PPME1Q9Y570 386 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 LAMA4Q16363 1823 aa8.95□□□□□ -0.98
CASP4-212ENST00000533730 GREB1LQ9C091 1923 aaPredicted RBP8.94□□□□□ -0.98
CASP4-212ENST00000533730 FKTNO75072 461 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 REC8O95072 547 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 MCM4P33991 863 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 GCLCP48506 637 aaPredicted RBP8.94□□□□□ -0.98
CASP4-212ENST00000533730 GIPRP48546 466 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 GYS2P54840 703 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 NRLP54845 237 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 AMPD3Q01432 767 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 PTH1RQ03431 593 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 TRDNQ13061 729 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 ZYXQ15942 572 aaKnown RBP8.94□□□□□ -0.98
CASP4-212ENST00000533730 RRP12Q5JTH9 1297 aaKnown RBP8.94□□□□□ -0.98
CASP4-212ENST00000533730 CHSY3Q70JA7 882 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 IQCA1Q86XH1 822 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 TBC1D10CQ8IV04 446 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 ACER1Q8TDN7 264 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 SMCR8Q8TEV9 937 aaPredicted RBP8.94□□□□□ -0.98
CASP4-212ENST00000533730 FERD3LQ96RJ6 166 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 LRRC3Q9BY71 257 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 UBE2OQ9C0C9 1292 aaKnown RBP8.94□□□□□ -0.98
CASP4-212ENST00000533730 VCPKMTQ9H867 229 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 TCP11L1Q9NUJ3 509 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 MTMR4Q9NYA4 1195 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 MAPK8IP1Q9UQF2 711 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 CEP350Q5VT06 3117 aa8.94□□□□□ -0.98
CASP4-212ENST00000533730 A0A1W2PRG0 241 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 WDR46O15213 610 aaKnown RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 PDPK1O15530 556 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 EPB41L2O43491 1005 aaKnown RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 KIF4AO95239 1232 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 VCAM1P19320 739 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 ITPKAP23677 461 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 RPS26P62854 115 aaKnown RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 GPLD1P80108 840 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 SP3Q02447 781 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 SEPT6Q14141 434 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 KIF22Q14807 665 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 FAM47AQ5JRC9 791 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 TREML2Q5T2D2 321 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 KIAA0907Q7Z7F0 614 aaPredicted RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 RALYLQ86SE5 291 aaKnown RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 CLEC10AQ8IUN9 316 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 SIAH1Q8IUQ4 282 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 TRIM42Q8IWZ5 723 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 CEP95Q96GE4 821 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 ERO1AQ96HE7 468 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 TTC14Q96N46 770 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 HHIPQ96QV1 700 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 LSG1Q9H089 658 aaKnown RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 ASCC2Q9H1I8 757 aaPredicted RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 DDX56Q9NY93 547 aaKnown RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 CLIP2Q9UDT6 1046 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 NAGPAQ9UK23 515 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 SLC6A14Q9UN76 642 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 PCDHB5Q9Y5E4 795 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 RBM8AQ9Y5S9 174 aaKnown RBP8.93□□□□□ -0.98
CASP4-212ENST00000533730 MYPNQ86TC9 1320 aa8.93□□□□□ -0.98
CASP4-212ENST00000533730 NEDD4P46934 1319 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms