RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SEZ6LQ9BYH1 1024 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 GRIN2DO15399 1336 aa18.97■□□□□ 0.63
SF3B2-211ENST00000531041 POTEB3A0JP26 581 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 STBD1O95210 358 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 MARK3P27448 753 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 PSMC6P62333 389 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 PRKCEQ02156 737 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 ITGA7Q13683 1181 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 CSPP1Q1MSJ5 1256 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 NBPF20Q3BBV1 942 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 SPECC1Q5M775 1068 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 POTEBQ6S5H4 581 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 USP49Q70CQ1 688 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 NECAB2Q7Z6G3 386 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 CABP7Q86V35 215 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 CKAP2LQ8IYA6 745 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 SLC43A3Q8NBI5 491 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 ATP8B4Q8TF62 1192 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 BBXQ8WY36 941 aaPredicted RBP18.96■□□□□ 0.63
SF3B2-211ENST00000531041 SYMPKQ92797 1274 aaKnown RBP18.96■□□□□ 0.63
SF3B2-211ENST00000531041 EPSTI1Q96J88 318 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 SENP6Q9GZR1 1112 aaPredicted RBP18.96■□□□□ 0.63
SF3B2-211ENST00000531041 C11orf49Q9H6J7 331 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 KDM3AQ9Y4C1 1321 aa18.96■□□□□ 0.63
SF3B2-211ENST00000531041 A0A0U1RQG5 324 aaPredicted RBP18.95■□□□□ 0.62
SF3B2-211ENST00000531041 HBP1O60381 514 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 OATP04181 439 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 ECM1Q16610 540 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 XKR3Q5GH77 459 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 NFRKBQ6P4R8 1299 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 SHC4Q6S5L8 630 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 SESTD1Q86VW0 696 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 KCTD17Q8N5Z5 321 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 NRBP2Q9NSY0 501 aa18.95■□□□□ 0.62
SF3B2-211ENST00000531041 XRCC6P12956 609 aaKnown RBP eCLIP18.94■□□□□ 0.62
SF3B2-211ENST00000531041 TXLNAP40222 546 aa18.94■□□□□ 0.62
SF3B2-211ENST00000531041 SOX10P56693 466 aa18.94■□□□□ 0.62
SF3B2-211ENST00000531041 PTPN11Q06124 597 aaPredicted RBP18.94■□□□□ 0.62
SF3B2-211ENST00000531041 RESP18Q5W5W9 173 aa18.94■□□□□ 0.62
SF3B2-211ENST00000531041 CALML4Q96GE6 196 aa18.94■□□□□ 0.62
SF3B2-211ENST00000531041 NIFKQ9BYG3 293 aaKnown RBP18.94■□□□□ 0.62
SF3B2-211ENST00000531041 NT5C3AQ9H0P0 336 aa18.94■□□□□ 0.62
SF3B2-211ENST00000531041 MYH11P35749 1972 aa18.94■□□□□ 0.62
SF3B2-211ENST00000531041 COL1A2P08123 1366 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 ARVCFO00192 962 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 SMIM10L2AP0DMW4 78 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 SMIM10L2BP0DMW5 78 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 HOXC8P31273 242 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 YWHABP31946 246 aaKnown RBP18.93■□□□□ 0.62
SF3B2-211ENST00000531041 CDK7P50613 346 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 CHMP4BP1P59074 171 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 GRB10Q13322 594 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 C1orf53Q5VUE5 145 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 POTEGQ6S5H5 508 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 SLC39A5Q6ZMH5 540 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 ANO5Q75V66 913 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 OTUD6AQ7L8S5 288 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 C7orf31Q8N865 590 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 TMEM87AQ8NBN3 555 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 CDK5RAP3Q96JB5 506 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 PNMA5Q96PV4 448 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 NACC1Q96RE7 527 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 ANKEF1Q9NU02 776 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 DDX19AQ9NUU7 478 aaKnown RBP18.93■□□□□ 0.62
SF3B2-211ENST00000531041 HDAC6Q9UBN7 1215 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 KIAA1024Q9UPX6 916 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 TRPC6Q9Y210 931 aa18.93■□□□□ 0.62
SF3B2-211ENST00000531041 NRCAMQ92823 1304 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 A0A1W2PQ27 194 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 A0A1W2PQ64 194 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 A0A1W2PQD8 194 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 INSRRP14616 1297 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 CMA1P23946 247 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 SNX17Q15036 470 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 TMEM119Q4V9L6 283 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 ZNF484Q5JVG2 852 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 TRMT1LQ7Z2T5 733 aaKnown RBP18.92■□□□□ 0.62
SF3B2-211ENST00000531041 GBP4Q96PP9 640 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 SEPT9Q9UHD8 586 aaPredicted RBP18.92■□□□□ 0.62
SF3B2-211ENST00000531041 GTF2IRD1Q9UHL9 959 aa18.92■□□□□ 0.62
SF3B2-211ENST00000531041 RRN3P2A6NIE6 340 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 DDX11L8A8MPP1 907 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 ZBTB42B2RXF5 422 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 ZBTB39O15060 712 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 ADAM17P78536 824 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 PPFIA1Q13136 1202 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 KARSQ15046 597 aaKnown RBP18.91■□□□□ 0.62
SF3B2-211ENST00000531041 TARBP2Q15633 366 aaKnown RBP18.91■□□□□ 0.62
SF3B2-211ENST00000531041 ZRSR1Q15695 479 aaKnown RBP18.91■□□□□ 0.62
SF3B2-211ENST00000531041 GRIK4Q16099 956 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 PIGOQ8TEQ8 1089 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 PPP1R13LQ8WUF5 828 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 FAM13BQ9NYF5 915 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 DBR1Q9UK59 544 aaKnown RBP18.91■□□□□ 0.62
SF3B2-211ENST00000531041 MROH7Q68CQ1 1323 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 GNAT1P11488 350 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 FAM47CQ5HY64 1035 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 RASSF8Q8NHQ8 419 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 LMBR1Q8WVP7 490 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms