RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 MLLT1Q03111 559 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 BFSP2Q13515 415 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TMED2Q15363 201 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TRIM16LQ309B1 348 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 FAM180AQ6UWF9 173 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 GADL1Q6ZQY3 521 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TCEANC2Q96MN5 208 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 CRAMP1Q96RY5 1269 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 EPAS1Q99814 870 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 PKD2L2Q9NZM6 624 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 POLKQ9UBT6 870 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 MAP3K15Q6ZN16 1313 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 BIRC5O15392 142 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ZSCAN9O15535 394 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ZNF500O60304 480 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 EXOC3O60645 756 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 STAM2O75886 525 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 NNTQ13423 1086 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 GRAPQ13588 217 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 PTK2BQ14289 1009 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TSC22D1Q15714 1073 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 CCDC142Q17RM4 750 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 RARS2Q5T160 578 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 SPOPLQ6IQ16 392 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ANGPTL8Q6UXH0 198 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 FASTKD5Q7L8L6 764 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 CCDC103Q8IW40 242 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 RTL3Q8N8U3 475 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 FBXO18Q8NFZ0 1043 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 B4GALNT2Q8NHY0 566 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 GRAPLQ8TC17 118 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 SNRNP27Q8WVK2 155 aaKnown RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 MAML1Q92585 1016 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 TTC25Q96NG3 672 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 GPR101Q96P66 508 aaPredicted RBP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 ZBED2Q9BTP6 218 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 AATFQ9NY61 560 aaKnown RBP eCLIP7.78□□□□□ -1.16
CTNND1-229ENST00000531014 AIPL1Q9NZN9 384 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 MPP6Q9NZW5 540 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 FIS1Q9Y3D6 152 aa7.78□□□□□ -1.16
CTNND1-229ENST00000531014 LRRIQ1Q96JM4 1722 aa7.77□□□□□ -1.16
CTNND1-229ENST00000531014 IQANK1A0A1B0GTG1 560 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 GNA14O95837 355 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 RARSP54136 660 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 DMPKQ09013 629 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 CAPRIN1Q14444 709 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 GPC2Q8N158 579 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 NUDCD1Q96RS6 583 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 RHBDL2Q9NX52 303 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 SPHKAPQ2M3C7 1700 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 GLTPD2A6NH11 291 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 NFIBO00712 420 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 FKTNO75072 461 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 PDE5AO76074 875 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 NR1D1P20393 614 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 KRT17Q04695 432 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 SCYL2Q6P3W7 929 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 CRLF3Q8IUI8 442 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 PARK7Q99497 189 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 DONSONQ9NYP3 566 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 SLC4A4Q9Y6R1 1079 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 NCAPD2Q15021 1401 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 TLR3O15455 904 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 SERPINB3P29508 390 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 USP14P54578 494 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 EIF3BP55884 814 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 FOXD4Q12950 439 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 MCMDC2Q4G0Z9 681 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 PPHLN1Q8NEY8 458 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 KCNV2Q8TDN2 545 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 BTN2A2Q8WVV5 523 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 SSH1Q8WYL5 1049 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 ESYT1Q9BSJ8 1104 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 OLFML3Q9NRN5 406 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 ATP5J2-PTCD1G3V325 749 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 CDC40O60508 579 aaKnown RBP eCLIP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 DIAPH2O60879 1101 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 CPP00450 1065 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 ABCB4P21439 1286 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 ZNF445P59923 1031 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 ACTN3Q08043 901 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 TAF1CQ15572 869 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 KIF19Q2TAC6 998 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 TRMT44Q8IYL2 757 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 BBS5Q8N3I7 341 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 CDC26Q8NHZ8 85 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 OTUB1Q96FW1 271 aaPredicted RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 PPARGC1AQ9UBK2 798 aaKnown RBP7.77□□□□□ -1.17
CTNND1-229ENST00000531014 ZNF212Q9UDV6 495 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 CDC23Q9UJX2 597 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 PPP2R2CQ9Y2T4 447 aa7.77□□□□□ -1.17
CTNND1-229ENST00000531014 H7C0C1 242 aa7.76□□□□□ -1.17
CTNND1-229ENST00000531014 STXBP3O00186 592 aa7.76□□□□□ -1.17
CTNND1-229ENST00000531014 RGL2O15211 777 aa7.76□□□□□ -1.17
CTNND1-229ENST00000531014 TRIM27P14373 513 aa7.76□□□□□ -1.17
CTNND1-229ENST00000531014 ATP5OP48047 213 aa7.76□□□□□ -1.17
CTNND1-229ENST00000531014 RAD23BP54727 409 aa7.76□□□□□ -1.17
CTNND1-229ENST00000531014 FBXW4P57775 412 aa7.76□□□□□ -1.17
CTNND1-229ENST00000531014 YWHAHQ04917 246 aaPredicted RBP7.76□□□□□ -1.17
CTNND1-229ENST00000531014 TBL3Q12788 808 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms