RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CKAP2LQ8IYA6 745 aa17.18■□□□□ 0.34
CCS-206ENST00000530961 NEK9Q8TD19 979 aa17.18■□□□□ 0.34
CCS-206ENST00000530961 BBXQ8WY36 941 aaPredicted RBP17.18■□□□□ 0.34
CCS-206ENST00000530961 NRBP2Q9NSY0 501 aa17.18■□□□□ 0.34
CCS-206ENST00000530961 TMEM39AQ9NV64 488 aa17.18■□□□□ 0.34
CCS-206ENST00000530961 PRKAG2Q9UGJ0 569 aa17.18■□□□□ 0.34
CCS-206ENST00000530961 TRPC6Q9Y210 931 aa17.18■□□□□ 0.34
CCS-206ENST00000530961 STK24Q9Y6E0 443 aa17.18■□□□□ 0.34
CCS-206ENST00000530961 EYSQ5T1H1 3165 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 BRD1O95696 1058 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
CCS-206ENST00000530961 PPFIA1Q13136 1202 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 SF3A1Q15459 793 aaKnown RBP17.17■□□□□ 0.34
CCS-206ENST00000530961 GDF6Q6KF10 455 aaPredicted RBP17.17■□□□□ 0.34
CCS-206ENST00000530961 ZNF396Q96N95 335 aaPredicted RBP17.17■□□□□ 0.34
CCS-206ENST00000530961 HSD17B14Q9BPX1 270 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 TRPV6Q9H1D0 765 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 TRMT13Q9NUP7 481 aaKnown RBP17.17■□□□□ 0.34
CCS-206ENST00000530961 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 ARIH1Q9Y4X5 557 aaPredicted RBP17.17■□□□□ 0.34
CCS-206ENST00000530961 IGSF9BQ9UPX0 1349 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 MCM3APO60318 1980 aa17.17■□□□□ 0.34
CCS-206ENST00000530961 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 KIAA0355O15063 1070 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 INSRRP14616 1297 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 ATP4AP20648 1035 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 PKP1Q13835 747 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 GRIK4Q16099 956 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 XKR3Q5GH77 459 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 ATL3Q6DD88 541 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 FAM173BQ6P4H8 233 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 ERMNQ8TAM6 284 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 SETD4Q9NVD3 440 aa17.16■□□□□ 0.34
CCS-206ENST00000530961 MORC2Q9Y6X9 1032 aaPredicted RBP17.16■□□□□ 0.34
CCS-206ENST00000530961 PIEZO1Q92508 2521 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 ZNF862O60290 1169 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 SLITRK3O94933 977 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 OATP04181 439 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 ADAM17P78536 824 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 NUCB2P80303 420 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 PRKCEQ02156 737 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 PTK7Q13308 1070 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
CCS-206ENST00000530961 C4orf19Q8IY42 314 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 IGSF22Q8N9C0 903 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 BANK1Q8NDB2 785 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 PPP1R13LQ8WUF5 828 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 LMBR1Q8WVP7 490 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
CCS-206ENST00000530961 EIF2AK1Q9BQI3 630 aaKnown RBP17.15■□□□□ 0.34
CCS-206ENST00000530961 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 ATP6V1DQ9Y5K8 247 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 CLIC4Q9Y696 253 aa17.15■□□□□ 0.34
CCS-206ENST00000530961 POTEMA6NI47 508 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 LYPLA2O95372 231 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 SYN1P17600 705 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 BFSP2Q13515 415 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 UGCGQ16739 394 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 HAUS3Q68CZ6 603 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 TAF2Q6P1X5 1199 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 DYDC2Q96IM9 177 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 USP28Q96RU2 1077 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 CDX2Q99626 313 aaPredicted RBP17.14■□□□□ 0.33
CCS-206ENST00000530961 LXNQ9BS40 222 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 POLR3CQ9BUI4 534 aaPredicted RBP17.14■□□□□ 0.33
CCS-206ENST00000530961 NIFKQ9BYG3 293 aaKnown RBP17.14■□□□□ 0.33
CCS-206ENST00000530961 TUFT1Q9NNX1 390 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 PRDM5Q9NQX1 630 aaPredicted RBP17.14■□□□□ 0.33
CCS-206ENST00000530961 RGL1Q9NZL6 768 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 COL1A2P08123 1366 aa17.14■□□□□ 0.33
CCS-206ENST00000530961 MBLAC1A4D2B0 266 aaPredicted RBP17.13■□□□□ 0.33
CCS-206ENST00000530961 TRIM43BA6NCK2 446 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 RPLP2P05387 115 aaKnown RBP17.13■□□□□ 0.33
CCS-206ENST00000530961 MUTP22033 750 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 RPA1P27694 616 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 DDIT3P35638 169 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 NASPP49321 788 aaPredicted RBP17.13■□□□□ 0.33
CCS-206ENST00000530961 ZNF200P98182 395 aaPredicted RBP17.13■□□□□ 0.33
CCS-206ENST00000530961 HIC1Q14526 733 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 SLC39A14Q15043 492 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 PTPAQ15257 358 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 IL17AQ16552 155 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 OTUD6AQ7L8S5 288 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 SERINC5Q86VE9 423 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 TPH2Q8IWU9 490 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 CAGE1Q8TC20 777 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 TRIM43Q96BQ3 446 aaPredicted RBP17.13■□□□□ 0.33
CCS-206ENST00000530961 AK8Q96MA6 479 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 HIPK3Q9H422 1215 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 TUBE1Q9UJT0 475 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 ZDHHC9Q9Y397 364 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 PPME1Q9Y570 386 aa17.13■□□□□ 0.33
CCS-206ENST00000530961 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms