RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SLC1A4P43007 532 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 TUBB4BP68371 445 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 ICA1Q05084 483 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 FMR1Q06787 632 aaKnown RBP eCLIP6.22□□□□□ -1.41
PCF11-205ENST00000530906 PSMD2Q13200 908 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 TUBB2AQ13885 445 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 IL17AQ16552 155 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 CALCRLQ16602 461 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 RSPO4Q2I0M5 234 aaPredicted RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 CCDC96Q2M329 555 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 LETM2Q2VYF4 491 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 CERKLQ49MI3 558 aaPredicted RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 NAALADL2Q58DX5 795 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 POTEAQ6S8J7 498 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 BTNL9Q6UXG8 535 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 ARHGAP27Q6ZUM4 889 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 PPFIBP1Q86W92 1011 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 HOMER1Q86YM7 354 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 SLFN12Q8IYM2 578 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 ADGRF4Q8IZF3 695 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 ADSSL1Q8N142 457 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 DEPDC4Q8N2C3 294 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 RETREG2Q8NC44 543 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 GIMAP8Q8ND71 665 aaPredicted RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 TBCKQ8TEA7 893 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 CDK5RAP3Q96JB5 506 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 C16orf45Q96MC5 204 aaPredicted RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 MBOAT7Q96N66 472 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 MTMR9Q96QG7 549 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 CAMKK2Q96RR4 588 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 BAG1Q99933 345 aaPredicted RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 TUBB2BQ9BVA1 445 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 PDCL3Q9H2J4 239 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 SH2D4AQ9H788 454 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 JMJD4Q9H9V9 463 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 GINM1Q9NU53 330 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 EXOC1Q9NV70 894 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 PNMA2Q9UL42 364 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 SCN9AQ15858 1988 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 ADAMTSL1Q8N6G6 1762 aa6.21□□□□□ -1.41
PCF11-205ENST00000530906 SERTM1A2A2V5 107 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 F8W031 263 aaPredicted RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 MPHOSPH10O00566 681 aaKnown RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 ETF1P62495 437 aaKnown RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 KARSQ15046 597 aaKnown RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 ABCB5Q2M3G0 1257 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 SLC4A8Q2Y0W8 1093 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 NOM1Q5C9Z4 860 aaKnown RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 TCP11X2Q5H9J9 407 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 NKAPLQ5M9Q1 402 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 HYIQ5T013 277 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 KRT79Q5XKE5 535 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 E4F1Q66K89 784 aaPredicted RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 SLFN13Q68D06 897 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 ISM2Q6H9L7 571 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 SV2BQ7L1I2 683 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 APTXQ7Z2E3 356 aaKnown RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 SLC51AQ86UW1 340 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 FAM83AQ86UY5 434 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 KIAA0825Q8IV33 1275 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 GRAMD1CQ8IYS0 662 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 LRRC47Q8N1G4 583 aaKnown RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 PDCL2Q8N4E4 241 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 OGFOD1Q8N543 542 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 TTLL6Q8N841 843 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 AGBL3Q8NEM8 1001 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 RASGRP4Q8TDF6 673 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 NELFBQ8WX92 580 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 NUP58Q9BVL2 599 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 AMNQ9BXJ7 453 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 TRIM9Q9C026 710 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 TMEM60Q9H2L4 133 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 PSTPIP2Q9H939 334 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 EHMT1Q9H9B1 1298 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 DBNDD1Q9H9R9 158 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 INTS13Q9NVM9 706 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 MAGEC2Q9UBF1 373 aaPredicted RBP6.21□□□□□ -1.42
PCF11-205ENST00000530906 LRWD1Q9UFC0 647 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 RABGAP1Q9Y3P9 1069 aa6.21□□□□□ -1.42
PCF11-205ENST00000530906 SPDYE3A6NKU9 549 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 LGALS16A8MUM7 142 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 KCNJ18B7U540 433 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 M0R082 166 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 N4BP3O15049 544 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 PPIP5K2O43314 1243 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 KLRC4O43908 158 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 MFAP3LO75121 409 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 VIL1P09327 827 aaKnown RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 CCDC175P0C221 793 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 EEF2P13639 858 aaKnown RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 PLCG1P19174 1290 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 MUTP22033 750 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 CCNE1P24864 410 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 DNM2P50570 870 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 RBM5P52756 815 aaKnown RBP eCLIP6.2□□□□□ -1.42
PCF11-205ENST00000530906 HIRAP54198 1017 aaPredicted RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 LRRC63Q05C16 580 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 NFIAQ12857 509 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms