RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 ME1P48163 572 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 CPT1AP50416 773 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 JAK3P52333 1124 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 TAP1Q03518 808 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 RESTQ13127 1097 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 NR5A1Q13285 461 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 MBTPS1Q14703 1052 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 RAB30Q15771 203 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 NBPF20Q3BBV1 942 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 Q4G0T1 1027 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 LRCH2Q5VUJ6 765 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 FOXD4L5Q5VV16 416 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 FAM160B1Q5W0V3 765 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 KRT79Q5XKE5 535 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 TYW1BQ6NUM6 668 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 FERMT3Q86UX7 667 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 VSIG10LQ86VR7 867 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 SESTD1Q86VW0 696 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 DHX37Q8IY37 1157 aaKnown RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 SMAP1Q8IYB5 467 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 EXOC8Q8IYI6 725 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 KCTD17Q8N5Z5 321 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 KRI1Q8N9T8 703 aaKnown RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 NEK9Q8TD19 979 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 RASGRP4Q8TDF6 673 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 ATXN2LQ8WWM7 1075 aaKnown RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 FOXD4L4Q8WXT5 416 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 KHSRPQ92945 711 aaKnown RBP eCLIP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 ATP6V0A1Q93050 837 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 CALML4Q96GE6 196 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 AK8Q96MA6 479 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 NECAB3Q96P71 396 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 ASB2Q96Q27 587 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 TAAR1Q96RJ0 339 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 RIT2Q99578 217 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 SENP7Q9BQF6 1050 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 MXRA8Q9BRK3 442 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 KATNAL1Q9BW62 490 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 SEZ6LQ9BYH1 1024 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 AZI2Q9H6S1 392 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 POLR3EQ9NVU0 708 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 THEGQ9P2T0 379 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 CCDC39Q9UFE4 941 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF215Q9UL58 517 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 PCDHA12Q9UN75 941 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 SAMM50Q9Y512 469 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 PCDHA11Q9Y5I1 949 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 MTCH2Q9Y6C9 303 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 M0R2N6 131 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 TNFRSF10AO00220 468 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 IPO5O00410 1097 aaKnown RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 SPTLC2O15270 562 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 PPP6R2O75170 966 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 GH1P01241 217 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 CXCL10P02778 98 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 CA3P07451 260 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 PSAPP07602 524 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 IQCF3P0C7M6 154 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 TXNP10599 105 aaKnown RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 MUTP22033 750 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 HOXC8P31273 242 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 ICAM3P32942 547 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 LONP1P36776 959 aaKnown RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 UBA7P41226 1012 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 SLC26A2P50443 739 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 TFF2Q03403 129 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 LAMC2Q13753 1193 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 ZRSR1Q15695 479 aaKnown RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF174Q15697 407 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 GDF6Q6KF10 455 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF746Q6NUN9 644 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 MIS18BP1Q6P0N0 1132 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 NFRKBQ6P4R8 1299 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 METTL7BQ6UX53 244 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 CCDC73Q6ZRK6 1079 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 SEPT14Q6ZU15 432 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 TMCO2Q7Z6W1 182 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 OR6J1Q8NGC5 347 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 IL31RAQ8NI17 732 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 OXER1Q8TDS5 423 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 ADAMTS19Q8TE59 1207 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 TNFRSF25Q93038 417 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 SYAP1Q96A49 352 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 FAM167AQ96KS9 214 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 INPP4AQ96PE3 977 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 MTG1Q9BT17 334 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 OSBPL7Q9BZF2 842 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 LRRC27Q9C0I9 530 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 NT5C3AQ9H0P0 336 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 JPH1Q9HDC5 661 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 TMEM260Q9NX78 707 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 RTEL1Q9NZ71 1219 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 UBIAD1Q9Y5Z9 338 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 MORC2Q9Y6X9 1032 aaPredicted RBP5.37□□□□□ -1.55
SSBP3-213ENST00000530618 TECTAO75443 2155 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 NFASCO94856 1347 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 VPS13AQ96RL7 3174 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 CACNA1HO95180 2353 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 PLXNA4Q9HCM2 1894 aa5.37□□□□□ -1.55
SSBP3-213ENST00000530618 EVPLQ92817 2033 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms