RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 SEPT1Q8WYJ6 367 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 CUL5Q93034 780 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 APOL5Q9BWW9 433 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 TLR9Q9NR96 1032 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 HCSTQ9UBK5 93 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 PADI3Q9ULW8 664 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 PLXNA3P51805 1871 aa13.01□□□□□ -0.33
SF3B2-208ENST00000529994 MEIS2O14770 477 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 INSRRP14616 1297 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 TRDNQ13061 729 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 PAK2Q13177 524 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 TMEM266Q2M3C6 531 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 IER5Q5VY09 327 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
SF3B2-208ENST00000529994 ZBTB33Q86T24 672 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 GIMAP8Q8ND71 665 aaPredicted RBP13□□□□□ -0.33
SF3B2-208ENST00000529994 FTHL17Q9BXU8 183 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 TRPV2Q9Y5S1 764 aa13□□□□□ -0.33
SF3B2-208ENST00000529994 RIF1Q5UIP0 2472 aaKnown RBP12.99□□□□□ -0.33
SF3B2-208ENST00000529994 ERICH2A1L162 156 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 M0QZ92 97 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 SGSM2O43147 1006 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 ITGB5P18084 799 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 ERVFC1P60507 584 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 TROAPQ12815 778 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 WTAPQ15007 396 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 XRRA1Q6P2D8 792 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 SUSD6Q92537 303 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 SMARCAD1Q9H4L7 1026 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 GINS2Q9Y248 185 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 PCDHB12Q9Y5F1 795 aa12.99□□□□□ -0.33
SF3B2-208ENST00000529994 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
SF3B2-208ENST00000529994 EVPLQ92817 2033 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 IGSF9BQ9UPX0 1349 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 RRN3P2A6NIE6 340 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 CYP21A2P08686 494 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 ATF7P17544 494 aaPredicted RBP12.98□□□□□ -0.33
SF3B2-208ENST00000529994 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 NFX1Q12986 1120 aaKnown RBP12.98□□□□□ -0.33
SF3B2-208ENST00000529994 DUSP6Q16828 381 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 FAM102BQ5T8I3 360 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 PLPP4Q5VZY2 271 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 LLGL2Q6P1M3 1020 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 RALYLQ86SE5 291 aaKnown RBP12.98□□□□□ -0.33
SF3B2-208ENST00000529994 THNSL1Q8IYQ7 743 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 GPRASP2Q96D09 838 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 PCYT2Q99447 389 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 MYL10Q9BUA6 226 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 CELF4Q9BZC1 486 aaKnown RBP12.98□□□□□ -0.33
SF3B2-208ENST00000529994 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 TMEM260Q9NX78 707 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 CDH22Q9UJ99 828 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 PCDHB7Q9Y5E2 793 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 DMDP11532 3685 aa12.98□□□□□ -0.33
SF3B2-208ENST00000529994 FAM186AA6NE01 2351 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 PIK3CDO00329 1044 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 MGEA5O60502 916 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 FGF18O76093 207 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 TECP42680 631 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 SARSP49591 514 aaKnown RBP12.97□□□□□ -0.33
SF3B2-208ENST00000529994 MTMR1Q13613 665 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 UBE2SQ16763 222 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 CATIPQ7Z7H3 387 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 RRP36Q96EU6 259 aaKnown RBP12.97□□□□□ -0.33
SF3B2-208ENST00000529994 CCDC136Q96JN2 1154 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 CDHR1Q96JP9 859 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
SF3B2-208ENST00000529994 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
SF3B2-208ENST00000529994 VPS13AQ96RL7 3174 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 NEFLP07196 543 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 KRT76Q01546 638 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 UBE3AQ05086 875 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 PLCB4Q15147 1175 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 ANKRD54Q6NXT1 300 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 ASCL5Q7RTU5 278 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.33
SF3B2-208ENST00000529994 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 IRF2BPLQ9H1B7 796 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 S1PR5Q9H228 398 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 AZI2Q9H6S1 392 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 PSTPIP2Q9H939 334 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 CDHR5Q9HBB8 845 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 JPH1Q9HDC5 661 aaPredicted RBP12.96□□□□□ -0.33
SF3B2-208ENST00000529994 AAASQ9NRG9 546 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 TYW1Q9NV66 732 aaKnown RBP12.96□□□□□ -0.33
SF3B2-208ENST00000529994 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.33
SF3B2-208ENST00000529994 PCDHA2Q9Y5H9 948 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 UBIAD1Q9Y5Z9 338 aa12.96□□□□□ -0.33
SF3B2-208ENST00000529994 hCG_1642624A0A1W2PR95 340 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 DENND3A2RUS2 1198 aa12.95□□□□□ -0.34
SF3B2-208ENST00000529994 E7EWF7 191 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms