RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 VSIG10LQ86VR7 867 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 EFHBQ8N7U6 833 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 ENAHQ8N8S7 591 aaPredicted RBP4.09□□□□□ -1.76
PTPRC-213ENST00000529828 ZNF454Q8N9F8 522 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 SPPL3Q8TCT6 385 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 MICAL1Q8TDZ2 1067 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 DNAJB3Q8WWF6 145 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 ZNF689Q96CS4 500 aaPredicted RBP4.09□□□□□ -1.76
PTPRC-213ENST00000529828 TTC14Q96N46 770 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 GPR20Q99678 358 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 PHF7Q9BWX1 381 aaPredicted RBP4.09□□□□□ -1.76
PTPRC-213ENST00000529828 AMNQ9BXJ7 453 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 FAM49AQ9H0Q0 323 aaPredicted RBP4.09□□□□□ -1.76
PTPRC-213ENST00000529828 AGO3Q9H9G7 860 aaKnown RBP4.09□□□□□ -1.76
PTPRC-213ENST00000529828 HELLSQ9NRZ9 838 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 PKD2L1Q9P0L9 805 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 RCAN3Q9UKA8 241 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 RWDD3Q9Y3V2 267 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 PCDHB15Q9Y5E8 787 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 PCDHA1Q9Y5I3 950 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 CDY2AQ9Y6F7 541 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 RALGAPA2Q2PPJ7 1873 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 CFAP47Q6ZTR5 3102 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 MYH7BA7E2Y1 1941 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PRR23AA6NEV1 266 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 GCOM1H8Y6P7 765 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-213ENST00000529828 CAND2O75155 1236 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 POLR2MP0CAP2 368 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 ARP10275 920 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 GNAT1P11488 350 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 MRPS9P82933 396 aaKnown RBP4.08□□□□□ -1.76
PTPRC-213ENST00000529828 COASYQ13057 564 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PPFIA1Q13136 1202 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 CBX2Q14781 532 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PTPN21Q16825 1174 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 TMEM266Q2M3C6 531 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 SLC35G1Q2M3R5 365 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 FAM26DQ5JW98 314 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 FBXO47Q5MNV8 452 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PLPP4Q5VZY2 271 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 METTL7BQ6UX53 244 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 STOX1Q6ZVD7 989 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 FRMD5Q7Z6J6 570 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 RTN4RL1Q86UN2 441 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-213ENST00000529828 IQCA1Q86XH1 822 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PLPP6Q8IY26 295 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PPP2R3CQ969Q6 453 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 EVI5LQ96CN4 794 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PIGSQ96S52 555 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 ZSCAN10Q96SZ4 725 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-213ENST00000529828 PRRX2Q99811 253 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 RNF41Q9H4P4 317 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-213ENST00000529828 TLE6Q9H808 572 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 EHMT1Q9H9B1 1298 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 ZNF215Q9UL58 517 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-213ENST00000529828 SALL3Q9BXA9 1300 aa4.08□□□□□ -1.76
PTPRC-213ENST00000529828 KLRF2D3W0D1 207 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ZNF213O14771 459 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 PDIA4P13667 645 aaKnown RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ICAM3P32942 547 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TCF7P36402 384 aaPredicted RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ADAM17P78536 824 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 GRIK4Q16099 956 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 PKN1Q16512 942 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 GNPTABQ3T906 1256 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 IFIT1BQ5T764 474 aaKnown RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ANKRD45Q5TZF3 282 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 KCNV1Q6PIU1 500 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 DGKHQ86XP1 1220 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TMEM105Q8N8V8 129 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 KREMEN2Q8NCW0 462 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TRAPPC12Q8WVT3 735 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 RILPL2Q969X0 211 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 RNF25Q96BH1 459 aaPredicted RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 PLVAPQ9BX97 442 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 USP26Q9BXU7 913 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TUBE1Q9UJT0 475 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 SPTBN2O15020 2390 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ZMYM6O95789 1325 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 KIAA1671Q9BY89 1806 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 PLXNA3P51805 1871 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 DOCK5Q9H7D0 1870 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ZBTB5O15062 677 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 BRD1O95696 1058 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ASGR2P07307 311 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 WEE2P0C1S8 567 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TGFB3P10600 412 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 SCG2P13521 617 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 PBX3P40426 434 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TECP42680 631 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 PDE1AP54750 535 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 ERVFC1P60507 584 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 MRPS6P82932 125 aaKnown RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 GHRHRQ02643 423 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 NEDD9Q14511 834 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 TSHZ1Q6ZSZ6 1077 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 NPAS4Q8IUM7 802 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 CMTR2Q8IYT2 770 aaKnown RBP4.07□□□□□ -1.76
PTPRC-213ENST00000529828 P2RX5Q93086 422 aa4.07□□□□□ -1.76
PTPRC-213ENST00000529828 RIPOR3Q96MK2 946 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms