RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 SNX17Q15036 470 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 TRIM60Q495X7 471 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 NFRKBQ6P4R8 1299 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 CKAP2LQ8IYA6 745 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 C7orf31Q8N865 590 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 ATP6V0A1Q93050 837 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 HSD17B14Q9BPX1 270 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 CHMP5Q9NZZ3 219 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 WRAP73Q9P2S5 460 aaPredicted RBP15.72■□□□□ 0.11
USF1-209ENST00000529476 HDAC6Q9UBN7 1215 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 FBXO2Q9UK22 296 aaPredicted RBP15.72■□□□□ 0.11
USF1-209ENST00000529476 TRPC6Q9Y210 931 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 TRIP12Q14669 1992 aaPredicted RBP15.72■□□□□ 0.11
USF1-209ENST00000529476 POTEB3A0JP26 581 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 SPTLC2O15270 562 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 PQBP1O60828 265 aaKnown RBP15.71■□□□□ 0.11
USF1-209ENST00000529476 MED24O75448 989 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 SLITRK3O94933 977 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 YEATS4O95619 227 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 SYN1P17600 705 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.11
USF1-209ENST00000529476 CDC25AP30304 524 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 QARSP47897 775 aaKnown RBP15.71■□□□□ 0.11
USF1-209ENST00000529476 SLC26A2P50443 739 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 RTP1P59025 263 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 HIC1Q14526 733 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 C1orf53Q5VUE5 145 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 POTEBQ6S5H4 581 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 TPH2Q8IWU9 490 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 ATP8B4Q8TF62 1192 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 LXNQ9BS40 222 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 RAB34Q9BZG1 259 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 CFAP45Q9UL16 551 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
USF1-209ENST00000529476 MORC2Q9Y6X9 1032 aaPredicted RBP15.71■□□□□ 0.11
USF1-209ENST00000529476 STBD1O95210 358 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 OATP04181 439 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 SPATA31C1P0DKV0 1188 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 INSRRP14616 1297 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 MAGEA10P43363 369 aaPredicted RBP15.7■□□□□ 0.1
USF1-209ENST00000529476 KRT85P78386 507 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 ZNF200P98182 395 aaPredicted RBP15.7■□□□□ 0.1
USF1-209ENST00000529476 TLE2Q04725 743 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 PTPN11Q06124 597 aaPredicted RBP15.7■□□□□ 0.1
USF1-209ENST00000529476 GDF6Q6KF10 455 aaPredicted RBP15.7■□□□□ 0.1
USF1-209ENST00000529476 SESTD1Q86VW0 696 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 CATSPER3Q86XQ3 398 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 FAM126BQ8IXS8 530 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 TDHQ8IZJ6 230 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 ERMNQ8TAM6 284 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 NEK9Q8TD19 979 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 SNX29Q8TEQ0 813 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 CLIC6Q96NY7 704 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 SEZ6LQ9BYH1 1024 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 CSRNP2Q9H175 543 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 TRPV6Q9H1D0 765 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 TRMT13Q9NUP7 481 aaKnown RBP15.7■□□□□ 0.1
USF1-209ENST00000529476 SETD4Q9NVD3 440 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 GTF2IRD1Q9UHL9 959 aa15.7■□□□□ 0.1
USF1-209ENST00000529476 SRPRBQ9Y5M8 271 aaKnown RBP15.7■□□□□ 0.1
USF1-209ENST00000529476 C17orf102A2RUQ5 167 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 TMEM150BA6NC51 233 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 B4GALT4O60513 344 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 PPP6R2O75170 966 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 LONP1P36776 959 aaKnown RBP15.69■□□□□ 0.1
USF1-209ENST00000529476 CCT6AP40227 531 aaKnown RBP15.69■□□□□ 0.1
USF1-209ENST00000529476 IGBP1P78318 339 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 PPFIA1Q13136 1202 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 GRIK4Q16099 956 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 SPECC1Q5M775 1068 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 ANKRD33Q7Z3H0 272 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 KRI1Q8N9T8 703 aaKnown RBP15.69■□□□□ 0.1
USF1-209ENST00000529476 LMBR1Q8WVP7 490 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 BBXQ8WY36 941 aaPredicted RBP15.69■□□□□ 0.1
USF1-209ENST00000529476 FAM167AQ96KS9 214 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 MMTAG2Q9BU76 263 aaKnown RBP15.69■□□□□ 0.1
USF1-209ENST00000529476 POLR3CQ9BUI4 534 aaPredicted RBP15.69■□□□□ 0.1
USF1-209ENST00000529476 ZSWIM4Q9H7M6 989 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 TUFT1Q9NNX1 390 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 RCOR1Q9UKL0 485 aa15.69■□□□□ 0.1
USF1-209ENST00000529476 MROH7Q68CQ1 1323 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 ARID2Q68CP9 1835 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 A0A087WWV3 80 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 DDX11L8A8MPP1 907 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 ZBTB39O15060 712 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 HBP1O60381 514 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.1
USF1-209ENST00000529476 RPA1P27694 616 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 HOXC8P31273 242 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 ECM1Q16610 540 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 PTGISQ16647 500 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 XKR3Q5GH77 459 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 KRT79Q5XKE5 535 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 HAUS3Q68CZ6 603 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 ANO5Q75V66 913 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 C4orf19Q8IY42 314 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 KCNG4Q8TDN1 519 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms