RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 GABBR1Q9UBS5 961 aa19■□□□□ 0.63
HIF3A-211ENST00000528563 SZT2Q5T011 3432 aa19■□□□□ 0.63
HIF3A-211ENST00000528563 ZBTB42B2RXF5 422 aa18.99■□□□□ 0.63
HIF3A-211ENST00000528563 ZNF862O60290 1169 aa18.99■□□□□ 0.63
HIF3A-211ENST00000528563 FAM109BQ6ICB4 259 aaPredicted RBP18.99■□□□□ 0.63
HIF3A-211ENST00000528563 TRAPPC12Q8WVT3 735 aa18.99■□□□□ 0.63
HIF3A-211ENST00000528563 BBXQ8WY36 941 aaPredicted RBP18.99■□□□□ 0.63
HIF3A-211ENST00000528563 ZBTB10Q96DT7 871 aa18.99■□□□□ 0.63
HIF3A-211ENST00000528563 MTIF3Q9H2K0 278 aaKnown RBP18.99■□□□□ 0.63
HIF3A-211ENST00000528563 PCDHA2Q9Y5H9 948 aa18.99■□□□□ 0.63
HIF3A-211ENST00000528563 TANC1Q9C0D5 1861 aa18.99■□□□□ 0.63
HIF3A-211ENST00000528563 WNT7AO00755 349 aa18.98■□□□□ 0.63
HIF3A-211ENST00000528563 CHMP2AO43633 222 aa18.98■□□□□ 0.63
HIF3A-211ENST00000528563 PPP2R5CQ13362 524 aa18.98■□□□□ 0.63
HIF3A-211ENST00000528563 ZNF484Q5JVG2 852 aa18.98■□□□□ 0.63
HIF3A-211ENST00000528563 MIER3Q7Z3K6 550 aa18.98■□□□□ 0.63
HIF3A-211ENST00000528563 VAV3Q9UKW4 847 aa18.98■□□□□ 0.63
HIF3A-211ENST00000528563 MYH9P35579 1960 aaKnown RBP18.98■□□□□ 0.63
HIF3A-211ENST00000528563 CHRNA1P02708 482 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 ACTN1P12814 892 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 KLRC1P26715 233 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 UGCGQ16739 394 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 MTHFD1LQ6UB35 978 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 CKAP2LQ8IYA6 745 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 DNAJB3Q8WWF6 145 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 OSBPL7Q9BZF2 842 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 SLC4A7Q9Y6M7 1214 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 IGSF9BQ9UPX0 1349 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 COL1A2P08123 1366 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 GRXCR1A8MXD5 290 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 RBAK-RBAKDNI3L0D1 243 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 EML1O00423 815 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 SLC34A2O95436 690 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 U2AF2P26368 475 aaKnown RBP eCLIP18.97■□□□□ 0.63
HIF3A-211ENST00000528563 TCTN1Q2MV58 587 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 RSPH3Q86UC2 560 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 SLFN12Q8IYM2 578 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 NRBP2Q9NSY0 501 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 KIF3AQ9Y496 699 aa18.97■□□□□ 0.63
HIF3A-211ENST00000528563 WDR81Q562E7 1941 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 SMIM35A0A1B0GVV1 85 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 STBD1O95210 358 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 BAG4O95429 457 aaKnown RBP18.96■□□□□ 0.63
HIF3A-211ENST00000528563 RPLP2P05387 115 aaKnown RBP18.96■□□□□ 0.63
HIF3A-211ENST00000528563 CTSHP09668 335 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 SPIRE1Q08AE8 756 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 CNKSR3Q6P9H4 555 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 FAM167AQ96KS9 214 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 MTMR9Q96QG7 549 aa18.96■□□□□ 0.63
HIF3A-211ENST00000528563 ZBBXA8MT70 800 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 KIF28PB7ZC32 967 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 MARCH6O60337 910 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 BAIAP3O94812 1187 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 GJB2P29033 226 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 MGAT3Q09327 533 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 CUL4AQ13619 759 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 PLEKHG4Q58EX7 1191 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 TRMT1LQ7Z2T5 733 aaKnown RBP18.95■□□□□ 0.62
HIF3A-211ENST00000528563 KIAA0319LQ8IZA0 1049 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 NME8Q8N427 588 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 DBF4BQ8NFT6 615 aa18.95■□□□□ 0.62
HIF3A-211ENST00000528563 ABHD14A-ACY1A0A1B0GW23 586 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 C22orf31O95567 290 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 OATP04181 439 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 PRKCEQ02156 737 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 CALCRLQ16602 461 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 Q7L0L9 218 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 DEFB123Q8N688 67 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 PHOSPHO2Q8TCD6 241 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 NIFKQ9BYG3 293 aaKnown RBP18.94■□□□□ 0.62
HIF3A-211ENST00000528563 FAM49AQ9H0Q0 323 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-211ENST00000528563 PCDHA12Q9UN75 941 aa18.94■□□□□ 0.62
HIF3A-211ENST00000528563 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-211ENST00000528563 NEMFO60524 1076 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 ATP2A2P16615 1042 aaKnown RBP18.93■□□□□ 0.62
HIF3A-211ENST00000528563 ATP2B1P20020 1258 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 PSMC5P62195 406 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 MRPS6P82932 125 aaKnown RBP18.93■□□□□ 0.62
HIF3A-211ENST00000528563 IKBKEQ14164 716 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 EPHA7Q15375 998 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 TARBP2Q15633 366 aaKnown RBP18.93■□□□□ 0.62
HIF3A-211ENST00000528563 XKR3Q5GH77 459 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 IER5Q5VY09 327 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 PBX4Q9BYU1 374 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 CEP131Q9UPN4 1083 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 SMC3Q9UQE7 1217 aa18.93■□□□□ 0.62
HIF3A-211ENST00000528563 MAGEB2O15479 319 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 DNAJB2P25686 324 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 MCM7P33993 719 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 PBX2P40425 430 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 TRAPPC10P48553 1259 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 MKRN4PQ13434 485 aaPredicted RBP18.92■□□□□ 0.62
HIF3A-211ENST00000528563 GNL2Q13823 731 aaKnown RBP18.92■□□□□ 0.62
HIF3A-211ENST00000528563 BANK1Q8NDB2 785 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 TMEM60Q9H2L4 133 aa18.92■□□□□ 0.62
HIF3A-211ENST00000528563 TTC12Q9H892 705 aaPredicted RBP18.92■□□□□ 0.62
HIF3A-211ENST00000528563 CDY2AQ9Y6F7 541 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms