RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 TRIM31Q9BZY9 425 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 LRRC27Q9C0I9 530 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 FAM107BQ9H098 131 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 ITGA4P13612 1032 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 PON1P27169 355 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 HOXA10P31260 410 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-207ENST00000528288 SF3A3Q12874 501 aaKnown RBP eCLIP8.17□□□□□ -1.1
C11orf54-207ENST00000528288 EXOC3L4Q17RC7 722 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 CERS3Q8IU89 383 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 CRAMP1Q96RY5 1269 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 DDX47Q9H0S4 455 aaKnown RBP8.17□□□□□ -1.1
C11orf54-207ENST00000528288 SWAP70Q9UH65 585 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 SSU72P8A0A1W2PR75 194 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 A0A1W2PRG0 241 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 RGL2O15211 777 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 HSF2BPO75031 334 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 TRIM49P0CI25 452 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 TRIM49CP0CI26 452 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 CYP2J2P51589 502 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 IRAK1P51617 712 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 LLGL1Q15334 1064 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 KNOP1Q1ED39 458 aaKnown RBP8.17□□□□□ -1.1
C11orf54-207ENST00000528288 IRF2BP2Q7Z5L9 587 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 ETNPPLQ8TBG4 499 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 LENG9Q96B70 501 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 KDM3AQ9Y4C1 1321 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 CLRN2A0PK11 232 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 NR3C1P04150 777 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 XRCC5P13010 732 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 ORC2Q13416 577 aaPredicted RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 KIAA1755Q5JYT7 1200 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 MYCT1Q8N699 235 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 EIF2AK1Q9BQI3 630 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 GCNT4Q9P109 453 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 AFF2P51816 1311 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 TISP43B9A030 160 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 TCP10L2B9ZVM9 353 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 OPLAHO14841 1288 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 BACH1O14867 736 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 AFPP02771 609 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 GCFC2P16383 781 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 HPDP32754 393 aaPredicted RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 EPHB4P54760 987 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 GUCY1A3Q02108 690 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 MKRN4PQ13434 485 aaPredicted RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 PRPF4BQ13523 1007 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 RPS6KA1Q15418 735 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 ARHGAP44Q17R89 818 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 ABCB5Q2M3G0 1257 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 ALKBH5Q6P6C2 394 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 MAATS1Q7Z4T9 603 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 BANK1Q8NDB2 785 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 BCAS4Q8TDM0 211 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 ACER1Q8TDN7 264 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 TAF4BQ92750 862 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 DYDC2Q96IM9 177 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 CEP63Q96MT8 703 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 AMNQ9BXJ7 453 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 CAPS2Q9BXY5 557 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 CELF4Q9BZC1 486 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 RASSF4Q9H2L5 321 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 OSGEPQ9NPF4 335 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 PLIN4Q96Q06 1357 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 ZNF233A6NK53 670 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 TBCAO75347 108 aaKnown RBP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 IVLP07476 585 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 MMP10P09238 476 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 CHRNA5P30532 468 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 NNTQ13423 1086 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 CFAP58Q5T655 872 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 CDAN1Q8IWY9 1227 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 BCCIPQ9P287 314 aaKnown RBP eCLIP8.16□□□□□ -1.1
C11orf54-207ENST00000528288 ZBTB21Q9ULJ3 1066 aa8.16□□□□□ -1.1
C11orf54-207ENST00000528288 FLT3P36888 993 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 SYDE2Q5VT97 1194 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 PPP1R18Q6NYC8 613 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
C11orf54-207ENST00000528288 GLYCTKQ8IVS8 523 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 LRRC4CQ9HCJ2 640 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 ASTN1O14525 1302 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 PRLRP16471 622 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 NT5C2P49902 561 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 AOC3Q16853 763 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 HYIQ5T013 277 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 IFT20Q8IY31 132 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 MSL3Q8N5Y2 521 aaKnown RBP8.15□□□□□ -1.1
C11orf54-207ENST00000528288 INPP4AQ96PE3 977 aaPredicted RBP8.15□□□□□ -1.1
C11orf54-207ENST00000528288 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 NEUROG2Q9H2A3 272 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 DPH5Q9H2P9 285 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 PCIF1Q9H4Z3 704 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 WRAP73Q9P2S5 460 aaPredicted RBP8.15□□□□□ -1.1
C11orf54-207ENST00000528288 PI4KBQ9UBF8 816 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 NAGPAQ9UK23 515 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 RABGAP1Q9Y3P9 1069 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 NR2E1Q9Y466 385 aa8.15□□□□□ -1.1
C11orf54-207ENST00000528288 RBAK-RBAKDNI3L0D1 243 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms