RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 RSPH10BP0C881 870 aa25.27■■□□□ 1.64
CKLF-206ENST00000526149 SFNP31947 248 aa25.27■■□□□ 1.64
CKLF-206ENST00000526149 JAK3P52333 1124 aa25.27■■□□□ 1.64
CKLF-206ENST00000526149 SAFBQ15424 915 aaKnown RBP eCLIP25.27■■□□□ 1.64
CKLF-206ENST00000526149 FOXP1Q9H334 677 aaPredicted RBP25.27■■□□□ 1.64
CKLF-206ENST00000526149 LAMA2P24043 3122 aaKnown RBP25.27■■□□□ 1.64
CKLF-206ENST00000526149 TET1Q8NFU7 2136 aa25.27■■□□□ 1.64
CKLF-206ENST00000526149 CAND2O75155 1236 aa25.26■■□□□ 1.63
CKLF-206ENST00000526149 PARNO95453 639 aaKnown RBP25.26■■□□□ 1.63
CKLF-206ENST00000526149 SMAD3P84022 425 aaKnown RBP25.26■■□□□ 1.63
CKLF-206ENST00000526149 FAM26DQ5JW98 314 aa25.26■■□□□ 1.63
CKLF-206ENST00000526149 TAF2Q6P1X5 1199 aa25.26■■□□□ 1.63
CKLF-206ENST00000526149 MIER3Q7Z3K6 550 aa25.26■■□□□ 1.63
CKLF-206ENST00000526149 TNPO1Q92973 898 aaKnown RBP25.26■■□□□ 1.63
CKLF-206ENST00000526149 FTOQ9C0B1 505 aaKnown RBP eCLIP25.26■■□□□ 1.632e-10■■□□□ 12.3
CKLF-206ENST00000526149 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.25■■□□□ 1.63
CKLF-206ENST00000526149 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.25■■□□□ 1.63
CKLF-206ENST00000526149 GRXCR1A8MXD5 290 aa25.25■■□□□ 1.63
CKLF-206ENST00000526149 CTSHP09668 335 aa25.25■■□□□ 1.63
CKLF-206ENST00000526149 PPP2R5CQ13362 524 aa25.25■■□□□ 1.63
CKLF-206ENST00000526149 RDM1Q8NG50 284 aa25.25■■□□□ 1.63
CKLF-206ENST00000526149 DNAJB3Q8WWF6 145 aa25.25■■□□□ 1.63
CKLF-206ENST00000526149 PCDHA2Q9Y5H9 948 aa25.25■■□□□ 1.63
CKLF-206ENST00000526149 CHRNA1P02708 482 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 KLRC1P26715 233 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 GJB2P29033 226 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 SPIRE1Q08AE8 756 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 MGAT3Q09327 533 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 CUL4AQ13619 759 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 ZNF484Q5JVG2 852 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 GPR153Q6NV75 609 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 MTHFD1LQ6UB35 978 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 TRMT1LQ7Z2T5 733 aaKnown RBP25.24■■□□□ 1.63
CKLF-206ENST00000526149 CKAP2LQ8IYA6 745 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 BBXQ8WY36 941 aaPredicted RBP25.24■■□□□ 1.63
CKLF-206ENST00000526149 KAT6AQ92794 2004 aa25.24■■□□□ 1.63
CKLF-206ENST00000526149 COL1A2P08123 1366 aa25.23■■□□□ 1.63
CKLF-206ENST00000526149 STBD1O95210 358 aa25.23■■□□□ 1.63
CKLF-206ENST00000526149 U2AF2P26368 475 aaKnown RBP eCLIP25.23■■□□□ 1.63
CKLF-206ENST00000526149 NOSTRINQ8IVI9 506 aa25.23■■□□□ 1.63
CKLF-206ENST00000526149 ZBBXA8MT70 800 aa25.22■■□□□ 1.63
CKLF-206ENST00000526149 ATP2B1P20020 1258 aa25.22■■□□□ 1.63
CKLF-206ENST00000526149 CNKSR3Q6P9H4 555 aa25.22■■□□□ 1.63
CKLF-206ENST00000526149 MTMR9Q96QG7 549 aa25.22■■□□□ 1.63
CKLF-206ENST00000526149 MTIF3Q9H2K0 278 aaKnown RBP25.22■■□□□ 1.63
CKLF-206ENST00000526149 TMEM60Q9H2L4 133 aa25.22■■□□□ 1.63
CKLF-206ENST00000526149 SMIM35A0A1B0GVV1 85 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 OATP04181 439 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 ACTN1P12814 892 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 PRKCEQ02156 737 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 Q7L0L9 218 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 SLFN12Q8IYM2 578 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 DBF4BQ8NFT6 615 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 FAM49AQ9H0Q0 323 aaPredicted RBP25.21■■□□□ 1.63
CKLF-206ENST00000526149 SLC4A7Q9Y6M7 1214 aa25.21■■□□□ 1.63
CKLF-206ENST00000526149 MARCH6O60337 910 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 NEMFO60524 1076 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 BAG4O95429 457 aaKnown RBP25.2■■□□□ 1.62
CKLF-206ENST00000526149 SLC34A2O95436 690 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 C22orf31O95567 290 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 CALCRLQ16602 461 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 PLEKHG4Q58EX7 1191 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 BANK1Q8NDB2 785 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 FAM167AQ96KS9 214 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 SMC3Q9UQE7 1217 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 WDR81Q562E7 1941 aa25.2■■□□□ 1.62
CKLF-206ENST00000526149 MCM7P33993 719 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 PBX2P40425 430 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 MKRN4PQ13434 485 aaPredicted RBP25.19■■□□□ 1.62
CKLF-206ENST00000526149 RSPH3Q86UC2 560 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 KIAA0319LQ8IZA0 1049 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 PBX4Q9BYU1 374 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 NRBP2Q9NSY0 501 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 WRAP73Q9P2S5 460 aaPredicted RBP25.19■■□□□ 1.62
CKLF-206ENST00000526149 KIF3AQ9Y496 699 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.19■■□□□ 1.62
CKLF-206ENST00000526149 CDY2AQ9Y6F7 541 aa25.19■■□□□ 1.62
CKLF-206ENST00000526149 TMEM150BA6NC51 233 aa25.18■■□□□ 1.62
CKLF-206ENST00000526149 BAIAP3O94812 1187 aa25.18■■□□□ 1.62
CKLF-206ENST00000526149 TOB1P50616 345 aaPredicted RBP25.18■■□□□ 1.62
CKLF-206ENST00000526149 MRPS6P82932 125 aaKnown RBP25.18■■□□□ 1.62
CKLF-206ENST00000526149 EPHA7Q15375 998 aa25.18■■□□□ 1.62
CKLF-206ENST00000526149 TARBP2Q15633 366 aaKnown RBP25.18■■□□□ 1.62
CKLF-206ENST00000526149 ZNF174Q15697 407 aa25.18■■□□□ 1.62
CKLF-206ENST00000526149 NCAPH2Q6IBW4 605 aa25.18■■□□□ 1.62
CKLF-206ENST00000526149 LINC01465Q8N7H1 131 aa25.18■■□□□ 1.62
CKLF-206ENST00000526149 CEP89Q96ST8 783 aa25.18■■□□□ 1.62
CKLF-206ENST00000526149 MYH9P35579 1960 aaKnown RBP25.18■■□□□ 1.62
CKLF-206ENST00000526149 DNAJB2P25686 324 aa25.17■■□□□ 1.62
CKLF-206ENST00000526149 TXKP42681 527 aa25.17■■□□□ 1.62
CKLF-206ENST00000526149 WDR5P61964 334 aaKnown RBP25.17■■□□□ 1.62
CKLF-206ENST00000526149 PSMC5P62195 406 aa25.17■■□□□ 1.62
CKLF-206ENST00000526149 TMEM62Q0P6H9 643 aa25.17■■□□□ 1.62
CKLF-206ENST00000526149 GNL2Q13823 731 aaKnown RBP25.17■■□□□ 1.62
CKLF-206ENST00000526149 NBR1Q14596 966 aa25.17■■□□□ 1.62
CKLF-206ENST00000526149 XKR3Q5GH77 459 aa25.17■■□□□ 1.62
CKLF-206ENST00000526149 NIFKQ9BYG3 293 aaKnown RBP25.17■■□□□ 1.62
CKLF-206ENST00000526149 TTC12Q9H892 705 aaPredicted RBP25.17■■□□□ 1.62
CKLF-206ENST00000526149 PCDHA12Q9UN75 941 aa25.17■■□□□ 1.62
CKLF-206ENST00000526149 ABHD14A-ACY1A0A1B0GW23 586 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms