RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 SH3D21A4FU49 640 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 GABRDO14764 452 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 SLC9A1P19634 815 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 RAB27AP51159 221 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 NEK2P51955 445 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 IRF9Q00978 393 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 OTOP3Q7RTS5 596 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 DCP2Q8IU60 420 aaKnown RBP7.83□□□□□ -1.16
SKP1-213ENST00000524288 FEZF2Q8TBJ5 459 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 BOCQ9BWV1 1114 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 EPB41L1Q9H4G0 881 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 AASDHPPTQ9NRN7 309 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
SKP1-213ENST00000524288 H7C1D1 291 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 SCDO00767 359 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 MT-CO1P00395 513 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 PLA2G1BP04054 148 aaKnown RBP7.82□□□□□ -1.16
SKP1-213ENST00000524288 BUD31P41223 144 aaPredicted RBP7.82□□□□□ -1.16
SKP1-213ENST00000524288 IARSP41252 1262 aaKnown RBP7.82□□□□□ -1.16
SKP1-213ENST00000524288 KCNC1P48547 511 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 EPHB1P54762 984 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 SLURP1P55000 103 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 LACTBP83111 547 aaPredicted RBP7.82□□□□□ -1.16
SKP1-213ENST00000524288 SPIRE1Q08AE8 756 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 GPR19Q15760 415 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 SYDE2Q5VT97 1194 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 LIPIQ6XZB0 460 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 CLRN3Q8NCR9 226 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 SH3RF2Q8TEC5 729 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 SLC5A5Q92911 643 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 RXFP1Q9HBX9 757 aa7.82□□□□□ -1.16
SKP1-213ENST00000524288 TNKSO95271 1327 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 LCHNA4D1U4 455 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 MAN2B1O00754 1011 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 TGM5O43548 720 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 DGKIO75912 1065 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 NTRK1P04629 796 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 ZBTB48P10074 688 aaPredicted RBP7.81□□□□□ -1.16
SKP1-213ENST00000524288 OCRLQ01968 901 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 CACNB2Q08289 660 aaPredicted RBP7.81□□□□□ -1.16
SKP1-213ENST00000524288 PPP2R5AQ15172 486 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 DDB1Q16531 1140 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 EP400NLQ6ZTU2 488 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 OTOP1Q7RTM1 612 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 ZBTB46Q86UZ6 589 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 Q8N1Y9 231 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 HOOK2Q96ED9 719 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 PCDH18Q9HCL0 1135 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 X6R8D5 127 aa7.81□□□□□ -1.16
SKP1-213ENST00000524288 DVL2O14641 736 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 SCGB1D2O95969 90 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 LTFP02788 710 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 MYBL2P10244 700 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 MC3RP41968 323 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 KIF11P52732 1056 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 NFE2Q16621 373 aaPredicted RBP7.8□□□□□ -1.16
SKP1-213ENST00000524288 PTPN21Q16825 1174 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 ARHGAP44Q17R89 818 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 BROXQ5VW32 411 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 NOSTRINQ8IVI9 506 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 CMIPQ8IY22 773 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 KIAA1958Q8N8K9 716 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.8□□□□□ -1.16
SKP1-213ENST00000524288 AP5M1Q9H0R1 490 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 TOMM22Q9NS69 142 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 ZIM2Q9NZV7 527 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 DSEQ9UL01 958 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 SRPK3Q9UPE1 567 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 SIT1Q9Y3P8 196 aa7.8□□□□□ -1.16
SKP1-213ENST00000524288 SLC27A2O14975 620 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 AKAP10O43572 662 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 ULK1O75385 1050 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 ZNF174Q15697 407 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 HABP4Q5JVS0 413 aaKnown RBP7.79□□□□□ -1.16
SKP1-213ENST00000524288 ZDHHC14Q8IZN3 488 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 EFHBQ8N7U6 833 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 SMARCC2Q8TAQ2 1214 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 AHCYL2Q96HN2 611 aaKnown RBP7.79□□□□□ -1.16
SKP1-213ENST00000524288 ELF4Q99607 663 aaPredicted RBP7.79□□□□□ -1.16
SKP1-213ENST00000524288 PCIF1Q9H4Z3 704 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 C14orf119Q9NWQ9 140 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 GABBR1Q9UBS5 961 aa7.79□□□□□ -1.16
SKP1-213ENST00000524288 TSPAN6O43657 245 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 HIP1RO75146 1068 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 CELA3BP08861 270 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 PTX3P26022 381 aaPredicted RBP7.78□□□□□ -1.16
SKP1-213ENST00000524288 SLC6A11P48066 632 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 ERVK-21P61565 698 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 TMEM132BQ14DG7 1078 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 MROH9Q5TGP6 573 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 CCDC181Q5TID7 509 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 HHIPL2Q6UWX4 724 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 RIOX2Q8IUF8 465 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 CBARPQ8N350 705 aaPredicted RBP7.78□□□□□ -1.16
SKP1-213ENST00000524288 SEC14L1Q92503 715 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 SLC6A20Q9NP91 592 aa7.78□□□□□ -1.16
SKP1-213ENST00000524288 NOB1Q9ULX3 412 aaKnown RBP7.78□□□□□ -1.16
SKP1-213ENST00000524288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.77□□□□□ -1.17
SKP1-213ENST00000524288 KRIT1O00522 736 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms