RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PHYKPLQ8IUZ5 450 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 CLRN3Q8NCR9 226 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 MZB1Q8WU39 189 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 ASB15Q8WXK1 588 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 RTF1Q92541 710 aaKnown RBP5.26□□□□□ -1.57
SKP1-212ENST00000523966 TMEM209Q96SK2 561 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 ZDHHC5Q9C0B5 715 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 IRF2BPLQ9H1B7 796 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 HSPBP1Q9NZL4 362 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 USP36Q9P275 1121 aaKnown RBP5.26□□□□□ -1.57
SKP1-212ENST00000523966 MSRAQ9UJ68 235 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 TRHDEQ9UKU6 1024 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 ST20-MTHFSA0A0A6YYL1 179 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.25□□□□□ -1.57
SKP1-212ENST00000523966 CYP7B1O75881 506 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 FBXO21O94952 628 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 CFBP00751 764 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 PTGS1P23219 599 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 AOAHP28039 575 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 NCKAP1LP55160 1127 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 ROM1Q03395 351 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 CD276Q5ZPR3 534 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 TMC5Q6UXY8 1006 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 DPP8Q6V1X1 898 aaPredicted RBP5.25□□□□□ -1.57
SKP1-212ENST00000523966 IGDCC4Q8TDY8 1250 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 STAG1Q8WVM7 1258 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 FERMT2Q96AC1 680 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 CLIC6Q96NY7 704 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 WRNIP1Q96S55 665 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 MCOLN1Q9GZU1 580 aa5.25□□□□□ -1.57
SKP1-212ENST00000523966 CCDC8Q9H0W5 538 aaPredicted RBP5.25□□□□□ -1.57
SKP1-212ENST00000523966 G3BP2Q9UN86 482 aaKnown RBP5.25□□□□□ -1.57
SKP1-212ENST00000523966 CARMIL2Q6F5E8 1435 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 GOLGA6L22H0YM25 854 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 ALDH1L1O75891 902 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 TMEM253P0C7T8 217 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 MYBL2P10244 700 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 SCAND1P57086 179 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 PFKPQ01813 784 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 SLC6A3Q01959 620 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 KLF1Q13351 362 aaPredicted RBP5.24□□□□□ -1.57
SKP1-212ENST00000523966 CR1LQ2VPA4 569 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 PRAMEF9Q5VWM5 478 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 ESRP1Q6NXG1 681 aaKnown RBP5.24□□□□□ -1.57
SKP1-212ENST00000523966 PGM2L1Q6PCE3 622 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 TTLL7Q6ZT98 887 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 B3GNT8Q7Z7M8 397 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 ZBTB46Q86UZ6 589 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 FAM26EQ8N5C1 309 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 SMARCC2Q8TAQ2 1214 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 JDP2Q8WYK2 163 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 RPGRQ92834 1020 aaKnown RBP5.24□□□□□ -1.57
SKP1-212ENST00000523966 C16orf92Q96LL3 132 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 ACAP3Q96P50 834 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 ZMAT4Q9H898 229 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 CNTD2Q9H8S5 307 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 SLC39A2Q9NP94 309 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 INCENPQ9NQS7 918 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 DLL4Q9NR61 685 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 AASDHPPTQ9NRN7 309 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 C14orf119Q9NWQ9 140 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 UCKL1Q9NWZ5 548 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 ARHGAP20Q9P2F6 1191 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 MBD1Q9UIS9 605 aaPredicted RBP5.24□□□□□ -1.57
SKP1-212ENST00000523966 MRFAP1Q9Y605 127 aa5.24□□□□□ -1.57
SKP1-212ENST00000523966 MYOCOSA0A1B0GUC4 107 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 SHTN1A0MZ66 631 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 RASSF10A6NK89 507 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 ZNF839A8K0R7 811 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 N4BP3O15049 544 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 CDR1P51861 262 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 FOXO4P98177 505 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 ADCY2Q08462 1091 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 CLUL1Q15846 466 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 SLFN12LQ6IEE8 588 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 PNMA8AQ86V59 439 aaPredicted RBP5.23□□□□□ -1.57
SKP1-212ENST00000523966 CILP2Q8IUL8 1156 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 TTLL6Q8N841 843 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 MAML3Q96JK9 1138 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 SLC38A3Q99624 504 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 SGPP1Q9BX95 441 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 ASPSCR1Q9BZE9 553 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 TOPORSQ9NS56 1045 aaPredicted RBP5.23□□□□□ -1.57
SKP1-212ENST00000523966 MKS1Q9NXB0 559 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 GALNT8Q9NY28 637 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 PCDHA5Q9Y5H7 936 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 IRS2Q9Y4H2 1338 aa5.23□□□□□ -1.57
SKP1-212ENST00000523966 PRPF6O94906 941 aaKnown RBP5.22□□□□□ -1.57
SKP1-212ENST00000523966 SNUPNO95149 360 aaKnown RBP5.22□□□□□ -1.57
SKP1-212ENST00000523966 C8BP07358 591 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 CT47B1P0C2W7 299 aaPredicted RBP5.22□□□□□ -1.57
SKP1-212ENST00000523966 ATF2P15336 505 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 MC3RP41968 323 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 ECE1P42892 770 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 GLRBP48167 497 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 NEK2P51955 445 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 EPHB1P54762 984 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 DLG4P78352 724 aa5.22□□□□□ -1.57
SKP1-212ENST00000523966 ALDH6A1Q02252 535 aaKnown RBP5.22□□□□□ -1.57
SKP1-212ENST00000523966 TTF1Q15361 905 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms