RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ITGA4P13612 1032 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 PTK2Q05397 1052 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 PARP10Q53GL7 1025 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 RAD54LQ92698 747 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 GJA10Q969M2 543 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 TSC22D3Q99576 134 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 FAM129AQ9BZQ8 928 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 DNAJC17Q9NVM6 304 aaKnown RBP9.8□□□□□ -0.84
CSMD1-212ENST00000523387 TMEM260Q9NX78 707 aa9.8□□□□□ -0.84
CSMD1-212ENST00000523387 TCP11X1B4DZS4 312 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 G3V3G9 751 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 H0Y3Z8 333 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 FAM13AO94988 1023 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 COPB2P35606 906 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 MRPL12P52815 198 aaKnown RBP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 SUSD4Q5VX71 490 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 PPFIBP2Q8ND30 876 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 COA7Q96BR5 231 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 CEP63Q96MT8 703 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 RUNDC3BQ96NL0 473 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 EYA3Q99504 573 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 SH3GL3Q99963 347 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 ETNK1Q9HBU6 452 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 GCNT4Q9P109 453 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 TBK1Q9UHD2 729 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 SETD1AO15047 1707 aaKnown RBP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 FERP16591 822 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 ATP2A2P16615 1042 aaKnown RBP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 FGFR4P22455 802 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 MECOMQ03112 1051 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 SEPT2Q15019 361 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 CLUL1Q15846 466 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 ADGRA1Q86SQ6 560 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 ZSCAN29Q8IWY8 852 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 FGFR1OP2Q9NVK5 253 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 DDX25Q9UHL0 483 aaKnown RBP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 ANAPC4Q9UJX5 808 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 MEGF6O75095 1541 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 F8VZ95 297 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 GHRP10912 638 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 GJC1P36383 396 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 MMP14P50281 582 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 SLC8A3P57103 927 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 MESDQ14696 234 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 ACCSLQ4AC99 568 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 PIGBQ92521 554 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 TNFRSF25Q93038 417 aa9.79□□□□□ -0.84
CSMD1-212ENST00000523387 INPP4AQ96PE3 977 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 USP15Q9Y4E8 981 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-212ENST00000523387 PASKQ96RG2 1323 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 KDM3AQ9Y4C1 1321 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 SRRM3A6NNA2 597 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 THAP12O43422 761 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 C21orf2O43822 256 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 UBOX5O94941 541 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 HNRNPH3P31942 346 aaKnown RBP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 GSTO1P78417 241 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 FUT2Q10981 343 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 PLS1Q14651 629 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 FAM47EQ6ZV65 393 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 GSTA5Q7RTV2 222 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 STMN2Q93045 179 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 ZBTB10Q96DT7 871 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 DBR1Q9UK59 544 aaKnown RBP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 C15orf41Q9Y2V0 281 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 CLIC2O15247 247 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 DNAJC8O75937 253 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 TDP2O95551 362 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 LMNB1P20700 586 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 SLC29A2Q14542 456 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 ZNF449Q6P9G9 518 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 TMC3Q7Z5M5 1100 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 SLC44A5Q8NCS7 719 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 GLG1Q92896 1179 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 OSBPL1AQ9BXW6 950 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 NALCNQ8IZF0 1738 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 KIF3CO14782 793 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 NQO1P15559 274 aaKnown RBP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 SLC9A1P19634 815 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 CCND1P24385 295 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 GRM4Q14833 912 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 STXBP4Q6ZWJ1 553 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 RDH13Q8NBN7 331 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 BAP1Q92560 729 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 SYN2Q92777 582 aaPredicted RBP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.78□□□□□ -0.84
CSMD1-212ENST00000523387 DNM3Q9UQ16 869 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 FRMD4BQ9Y2L6 1034 aa9.78□□□□□ -0.84
CSMD1-212ENST00000523387 ARHGAP23Q9P227 1491 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 AGTP01019 485 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 GSTA1P08263 222 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 PLA2G4BP0C869 781 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 FGFR2P21802 821 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 DRD4P21917 467 aa9.77□□□□□ -0.84
CSMD1-212ENST00000523387 PRDX5P30044 214 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms