RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CNNM3Q8NE01 707 aa13.83□□□□□ -0.2
PABPC1-219ENST00000522387 ENGASEQ8NFI3 743 aa13.83□□□□□ -0.2
PABPC1-219ENST00000522387 ZBTB10Q96DT7 871 aa13.83□□□□□ -0.2
PABPC1-219ENST00000522387 PCYT2Q99447 389 aa13.83□□□□□ -0.2
PABPC1-219ENST00000522387 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
PABPC1-219ENST00000522387 KINO60870 393 aaKnown RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 P4HBP07237 508 aaKnown RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 SUPT20HL2P0C7V6 817 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 QARSP47897 775 aaKnown RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 JAK3P52333 1124 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 NPEPPSP55786 919 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 MCM6Q14566 821 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 CCDC183Q5T5S1 534 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 SMAP1Q8IYB5 467 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 AP5M1Q9H0R1 490 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 BLZF1Q9H2G9 400 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 BHMT2Q9H2M3 363 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 AZI2Q9H6S1 392 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 HMX1Q9NP08 348 aaPredicted RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 XPNPEP3Q9NQH7 507 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 ZNF302Q9NR11 478 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 SYNRGQ9UMZ2 1314 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 MMP3P08254 477 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 SFNP31947 248 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 STAT5BP51692 787 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 TRMT44Q8IYL2 757 aaKnown RBP13.82□□□□□ -0.2
PABPC1-219ENST00000522387 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 CCSER1Q9C0I3 900 aa13.82□□□□□ -0.2
PABPC1-219ENST00000522387 MYL3P08590 195 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 ATP4AP20648 1035 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 IGBP1P78318 339 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 PNOCQ13519 176 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 FSCN1Q16658 493 aaKnown RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 DYMQ7RTS9 669 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 IQUBQ8NA54 791 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 DEFB118Q96PH6 123 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 RNPEPQ9H4A4 650 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 BLOC1S4Q9NUP1 217 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 LAMA3Q16787 3333 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 RANBP2P49792 3224 aaKnown RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 MYH9P35579 1960 aaKnown RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 NPHP3-ACAD11A0A0J9YXS1 232 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 DUSP11O75319 330 aaKnown RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 LGALS2P05162 132 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 YWHABP31946 246 aaKnown RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 PRMT2P55345 433 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 PRKCEQ02156 737 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 CXCL17Q6UXB2 119 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 ANO5Q75V66 913 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 CEP57L1Q8IYX8 460 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 TRAPPC12Q8WVT3 735 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 MTRQ99707 1265 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 PDCL3Q9H2J4 239 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 DNM3Q9UQ16 869 aa13.81□□□□□ -0.2
PABPC1-219ENST00000522387 MORC2Q9Y6X9 1032 aaPredicted RBP13.81□□□□□ -0.2
PABPC1-219ENST00000522387 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
PABPC1-219ENST00000522387 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 PSMC5P62195 406 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 E2F4Q16254 413 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 DGKDQ16760 1214 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 LARP4BQ92615 738 aaKnown RBP13.8□□□□□ -0.2
PABPC1-219ENST00000522387 ATG7O95352 703 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 SOX10P56693 466 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 MTERF2Q49AM1 385 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 KRBA2Q6ZNG9 492 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
PABPC1-219ENST00000522387 POLR3CQ9BUI4 534 aaPredicted RBP13.8□□□□□ -0.2
PABPC1-219ENST00000522387 TRPC6Q9Y210 931 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 WDR81Q562E7 1941 aa13.8□□□□□ -0.2
PABPC1-219ENST00000522387 SFI1A8K8P3 1242 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 H3BRB1 525 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 NKRFO15226 690 aaKnown RBP eCLIP13.79□□□□□ -0.2
PABPC1-219ENST00000522387 CTAGE5O15320 804 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 PTMAP06454 111 aaKnown RBP13.79□□□□□ -0.2
PABPC1-219ENST00000522387 PLA2G4BP0C869 781 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 CCL5P13501 91 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 ATP6V0A1Q93050 837 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 C16orf70Q9BSU1 422 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■□□ 16.8
PABPC1-219ENST00000522387 NT5C3AQ9H0P0 336 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 TUT1Q9H6E5 874 aaKnown RBP13.79□□□□□ -0.2
PABPC1-219ENST00000522387 TUFT1Q9NNX1 390 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 MAFBQ9Y5Q3 323 aaPredicted RBP13.79□□□□□ -0.2
PABPC1-219ENST00000522387 KDM3AQ9Y4C1 1321 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 A6NJR5 290 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 BIN1O00499 593 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 PPFIA4O75335 1185 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 CPT1AP50416 773 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 CUL4BQ13620 913 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 KCNA10Q16322 511 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 XKR9Q5GH70 373 aa13.79□□□□□ -0.2
PABPC1-219ENST00000522387 LHX8Q68G74 356 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms