RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-219	ENST00000522321	TRPC6	Q9Y210	931 aa		13.74	□□□□□ -0.21
SPIDR-219	ENST00000522321	GNE	Q9Y223	722 aa	Known RBP	13.74	□□□□□ -0.21
SPIDR-219	ENST00000522321	SYNRG	Q9UMZ2	1314 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321		A0A087X0B3	334 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	GSTTP1	A0A1W2PQM5	241 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321		E9PMD0	336 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	CTAGE5	O15320	804 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	ADCY6	O43306	1168 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	ACTN4	O43707	911 aa	Known RBP	13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	ATG7	O95352	703 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	MYC	P01106	439 aa	Predicted RBP	13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	OAT	P04181	439 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	LGALS2	P05162	132 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	PLA2G4B	P0C869	781 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	ZNF286B	P0CG31	522 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	SPATA31C1	P0DKV0	1188 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	PTGS1	P23219	599 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	MARK3	P27448	753 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	YWHAB	P31946	246 aa	Known RBP	13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	AFM	P43652	599 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	SLC26A2	P50443	739 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	SNW1	Q13573	536 aa	Known RBP	13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	CAMK4	Q16566	473 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	UGCG	Q16739	394 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	LONRF3	Q496Y0	759 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	C4orf19	Q8IY42	314 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	ENGASE	Q8NFI3	743 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	PIGO	Q8TEQ8	1089 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	ERAP1	Q9NZ08	941 aa		13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	TNRC18	O15417	2968 aa	Predicted RBP	13.73	□□□□□ -0.21
SPIDR-219	ENST00000522321	PPFIA4	O75335	1185 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	SMC2	O95347	1197 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	LYPLA2	O95372	231 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	EYA4	O95677	639 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	CHMP4BP1	P59074	171 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	MCM6	Q14566	821 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	POSTN	Q15063	836 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	E2F4	Q16254	413 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	ECM1	Q16610	540 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	XKR3	Q5GH77	459 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	RNF180	Q86T96	592 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	GPBP1	Q86WP2	473 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	TRIM50	Q86XT4	487 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	AFAP1L1	Q8TED9	768 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	CCDC47	Q96A33	483 aa	Known RBP	13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	TMEM106C	Q9BVX2	250 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	KATNAL1	Q9BW62	490 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	BHMT2	Q9H2M3	363 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	NRBP2	Q9NSY0	501 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321	TELO2	Q9Y4R8	837 aa		13.72	□□□□□ -0.21
SPIDR-219	ENST00000522321		A6NJR5	290 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	KPNA6	O60684	536 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	LGR5	O75473	907 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	PGK1	P00558	417 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	MYL1	P05976	194 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	GJA9	P57773	515 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	BEX3	Q00994	111 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	XKR9	Q5GH70	373 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	GNAS	Q5JWF2	1037 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	PLPPR4	Q7Z2D5	763 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	PAGE5	Q96GU1	130 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	CEP170P1	Q96L14	293 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	ANKEF1	Q9NU02	776 aa		13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.71	□□□□□ -0.21
SPIDR-219	ENST00000522321	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	IGKV6D-21	A0A0A0MT36	114 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	GTPBP6	O43824	516 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	TBCA	O75347	108 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	LETM1	O95202	739 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	ASIC1	P78348	528 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	MTERF2	Q49AM1	385 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	NAALADL2	Q58DX5	795 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	PLA2G4F	Q68DD2	849 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	KCNK18	Q7Z418	384 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	GRAMD1C	Q8IYS0	662 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	PCSK9	Q8NBP7	692 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	ATP8B4	Q8TF62	1192 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	BBX	Q8WY36	941 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	STAM	Q92783	540 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	SMARCE1	Q969G3	411 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	ANP32E	Q9BTT0	268 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	RNF208	Q9H0X6	261 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	UPF3A	Q9H1J1	476 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	BLOC1S4	Q9NUP1	217 aa		13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	DBR1	Q9UK59	544 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-219	ENST00000522321	KIAA1217	Q5T5P2	1943 aa		13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321		A0A087WWV3	80 aa		13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321		H3BRB1	525 aa		13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	ZNF862	O60290	1169 aa		13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	USO1	O60763	962 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	XRCC6	P12956	609 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	HOXD8	P13378	290 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	CCL5	P13501	91 aa		13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	POLG	P54098	1239 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	PSMC6	P62333	389 aa		13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	PNOC	Q13519	176 aa		13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	SYT2	Q8N9I0	419 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-219	ENST00000522321	PCYT2	Q99447	389 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms