RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 RESTQ13127 1097 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 RILPL1Q5EBL4 403 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 TTC38Q5R3I4 469 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 GDF6Q6KF10 455 aaPredicted RBP20.48■□□□□ 0.87
VEGFA-222ENST00000520948 BRAPQ7Z569 592 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 C4orf32Q8N8J7 132 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 KAT2BQ92831 832 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 NECAB3Q96P71 396 aaPredicted RBP20.48■□□□□ 0.87
VEGFA-222ENST00000520948 MTMR9Q96QG7 549 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 C16orf70Q9BSU1 422 aa20.48■□□□□ 0.87
VEGFA-222ENST00000520948 NOL7Q9UMY1 257 aaKnown RBP20.48■□□□□ 0.87
VEGFA-222ENST00000520948 ATP2B1P20020 1258 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 ACTR2P61160 394 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 ZNF174Q15697 407 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 ABHD15Q6UXT9 468 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 FERMT3Q86UX7 667 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 HERC6Q8IVU3 1022 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 ARNTL2Q8WYA1 636 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 CTAGE1Q96RT6 745 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 TMEM60Q9H2L4 133 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.47■□□□□ 0.87
VEGFA-222ENST00000520948 PCDHB6Q9Y5E3 794 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 MTCH2Q9Y6C9 303 aa20.47■□□□□ 0.87
VEGFA-222ENST00000520948 IGKV6D-21A0A0A0MT36 114 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 HAS3O00219 553 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 NOP56O00567 594 aaKnown RBP20.46■□□□□ 0.87
VEGFA-222ENST00000520948 MCM7P33993 719 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 TAP1Q03518 808 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 NBR1Q14596 966 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 LRCH2Q5VUJ6 765 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 ZNF746Q6NUN9 644 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-222ENST00000520948 SPRED2Q7Z698 418 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 TMCO2Q7Z6W1 182 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-222ENST00000520948 PCYT2Q99447 389 aa20.46■□□□□ 0.87
VEGFA-222ENST00000520948 PRRC2BQ5JSZ5 2229 aaKnown RBP20.46■□□□□ 0.87
VEGFA-222ENST00000520948 DDX39AO00148 427 aaKnown RBP20.45■□□□□ 0.86
VEGFA-222ENST00000520948 GTPBP6O43824 516 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-222ENST00000520948 NEMFO60524 1076 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 LGR5O75473 907 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 LGALS2P05162 132 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 COL9A1P20849 921 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 TCF7P36402 384 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-222ENST00000520948 KCNQ1P51787 676 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 KRT76Q01546 638 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 SP4Q02446 784 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 SLFN12Q8IYM2 578 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 CCDC155Q8N6L0 562 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 PHOSPHO2Q8TCD6 241 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 AFAP1L1Q8TED9 768 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 DHX38Q92620 1227 aaKnown RBP20.45■□□□□ 0.86
VEGFA-222ENST00000520948 TEKT3Q9BXF9 490 aa20.45■□□□□ 0.86
VEGFA-222ENST00000520948 ZSCAN16Q9H4T2 348 aaPredicted RBP20.45■□□□□ 0.86
VEGFA-222ENST00000520948 XIRP2A4UGR9 3374 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 GAS7O60861 476 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 BAG4O95429 457 aaKnown RBP20.44■□□□□ 0.86
VEGFA-222ENST00000520948 F2P00734 622 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 ZNF286BP0CG31 522 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 KCNJ6P48051 423 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 SPIRE1Q08AE8 756 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 PPP2R5CQ13362 524 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 PKP1Q13835 747 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 CALCRLQ16602 461 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 LRRC8DQ7L1W4 858 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 SMAP1Q8IYB5 467 aaPredicted RBP20.44■□□□□ 0.86
VEGFA-222ENST00000520948 CAGE1Q8TC20 777 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 UNC45AQ9H3U1 944 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 RAPGEFL1Q9UHV5 662 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 VAV3Q9UKW4 847 aa20.44■□□□□ 0.86
VEGFA-222ENST00000520948 WDR81Q562E7 1941 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 H3BRB1 525 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 TLL1O43897 1013 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 ZSCAN22P10073 491 aaPredicted RBP20.43■□□□□ 0.86
VEGFA-222ENST00000520948 SELPP16109 830 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 DDIT3P35638 169 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 WDR5P61964 334 aaKnown RBP20.43■□□□□ 0.86
VEGFA-222ENST00000520948 GPNMBQ14956 572 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 SESTD1Q86VW0 696 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 TUT1Q9H6E5 874 aaKnown RBP20.43■□□□□ 0.86
VEGFA-222ENST00000520948 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 HDAC6Q9UBN7 1215 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 ZDHHC9Q9Y397 364 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 PCDHA10Q9Y5I2 948 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 EMSYQ7Z589 1322 aa20.43■□□□□ 0.86
VEGFA-222ENST00000520948 TRANK1O15050 2925 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 LCHNA4D1U4 455 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 BMP1P13497 986 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 SFNP31947 248 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 PSEN2P49810 448 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 DEFB103AP81534 67 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 PTGDRQ13258 359 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 PLPPR4Q7Z2D5 763 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 C7orf31Q8N865 590 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 RDM1Q8NG50 284 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 DISC1Q9NRI5 854 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 GTF2IRD1Q9UHL9 959 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 PCDHA12Q9UN75 941 aa20.42■□□□□ 0.86
VEGFA-222ENST00000520948 EML1O00423 815 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 BRD1O95696 1058 aa20.41■□□□□ 0.86
VEGFA-222ENST00000520948 CKBP12277 381 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms