RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 MARCH8Q5T0T0 291 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 CREB3L3Q68CJ9 461 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 PLPPR4Q7Z2D5 763 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 ZNF710Q8N1W2 664 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 FBXL16Q8N461 479 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 ZNF713Q8N859 430 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 NEK9Q8TD19 979 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 LMBR1Q8WVP7 490 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 TNPO1Q92973 898 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 CLP1Q92989 425 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 ZNF689Q96CS4 500 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 MRPL38Q96DV4 380 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 SGSM3Q96HU1 749 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 OSBPL7Q9BZF2 842 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 SMARCAD1Q9H4L7 1026 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 RC3H2Q9HBD1 1191 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 ERAP1Q9NZ08 941 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 PCDHA6Q9UN73 950 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 PCDHA8Q9Y5H6 950 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 TTC3P53804 2025 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 NFASCO94856 1347 aa6.48□□□□□ -1.37
CTNNA1-219ENST00000520158 XIRP2A4UGR9 3374 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 PI4K2BG5E9Z4 385 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 MEIS1O00470 390 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 ENPP3O14638 875 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 NCK2O43639 380 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 SORBS3O60504 671 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 COL9A1P20849 921 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 CLK2P49760 499 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 SLC26A2P50443 739 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 ARHGAP4P98171 946 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 MTMR1Q13613 665 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 SKIV2LQ15477 1246 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 PTPROQ16827 1216 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 EPC2Q52LR7 807 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 PPP1R18Q6NYC8 613 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 APOA5Q6Q788 366 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 NFXL1Q6ZNB6 911 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 DHX32Q7L7V1 743 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 NIPA1Q7RTP0 329 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 RSPH3Q86UC2 560 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 TRIM50Q86XT4 487 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 TMEM192Q8IY95 271 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 MYOCDQ8IZQ8 938 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 MICALL1Q8N3F8 863 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 NME8Q8N427 588 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 FBXO22Q8NEZ5 403 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 GDPD5Q8WTR4 605 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 CRYGNQ8WXF5 182 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 KCNB2Q92953 911 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 IL17RAQ96F46 866 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 PCYT2Q99447 389 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 MXRA8Q9BRK3 442 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 C17orf80Q9BSJ5 609 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 MYL10Q9BUA6 226 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 IFIH1Q9BYX4 1025 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 GLT8D2Q9H1C3 349 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 RIC8AQ9NPQ8 531 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 KCNH7Q9NS40 1196 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 RBM28Q9NW13 759 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 NLRC5Q86WI3 1866 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 KDM3AQ9Y4C1 1321 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 BRWD1Q9NSI6 2320 aa6.47□□□□□ -1.37
CTNNA1-219ENST00000520158 GRXCR2A6NFK2 248 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 SPDYE3A6NKU9 549 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 GPR37L1O60883 481 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 DGKIO75912 1065 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 CYP3A4P08684 503 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 BMPR1AP36894 532 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 SREBF1P36956 1147 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 PPFIA1Q13136 1202 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 AP3B2Q13367 1082 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 LPIN1Q14693 890 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 GRIK4Q16099 956 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 CTC1Q2NKJ3 1217 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 CEP55Q53EZ4 464 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 NAALADL2Q58DX5 795 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 FBXO47Q5MNV8 452 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 UTP14CQ5TAP6 766 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 IER5Q5VY09 327 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 MCTP2Q6DN12 878 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 TYW1BQ6NUM6 668 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 SYNE3Q6ZMZ3 975 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 RUFY4Q6ZNE9 571 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 RTN4RL1Q86UN2 441 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 EGFL6Q8IUX8 553 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 FAM178BQ8IXR5 827 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 CMTR1Q8N1G2 835 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 PIBF1Q8WXW3 757 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 P2RX5Q93086 422 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 NECAB3Q96P71 396 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 NEK1Q96PY6 1258 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 PLVAPQ9BX97 442 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 FTHL17Q9BXU8 183 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 LMAN2LQ9H0V9 348 aa6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 UBE2ZQ9H832 354 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-219ENST00000520158 FAM217BQ9NTX9 383 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms