RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 AJUBAQ96IF1 538 aa4.88□□□□□ -1.63
HERC4-215ENST00000515753 TACO1Q9BSH4 297 aaKnown RBP4.88□□□□□ -1.63
HERC4-215ENST00000515753 SEC61A2Q9H9S3 476 aa4.88□□□□□ -1.63
HERC4-215ENST00000515753 KCND1Q9NSA2 647 aa4.88□□□□□ -1.63
HERC4-215ENST00000515753 EPHA5P54756 1037 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 DGCR2P98153 550 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 PAK1Q13153 545 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 NOLC1Q14978 699 aaKnown RBP eCLIP4.87□□□□□ -1.63
HERC4-215ENST00000515753 USP39Q53GS9 565 aaKnown RBP4.87□□□□□ -1.63
HERC4-215ENST00000515753 IFNL2Q8IZJ0 200 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 EXTL1Q92935 676 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 NEIL1Q96FI4 390 aaPredicted RBP4.87□□□□□ -1.63
HERC4-215ENST00000515753 CSRNP2Q9H175 543 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 ZSWIM4Q9H7M6 989 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 TMEM260Q9NX78 707 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 NUB1Q9Y5A7 615 aa4.87□□□□□ -1.63
HERC4-215ENST00000515753 H0Y858 1186 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 ENO2P09104 434 aaPredicted RBP4.86□□□□□ -1.63
HERC4-215ENST00000515753 GNAT1P11488 350 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 SPIRE1Q08AE8 756 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 AGBL4Q5VU57 503 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 RNF207Q6ZRF8 634 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 FUKQ8N0W3 1084 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 SYNPOQ8N3V7 929 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 SLC52A2Q9HAB3 445 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 NCOA5Q9HCD5 579 aaKnown RBP4.86□□□□□ -1.63
HERC4-215ENST00000515753 SLC39A2Q9NP94 309 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 SFMBT1Q9UHJ3 866 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 TRAF6Q9Y4K3 522 aa4.86□□□□□ -1.63
HERC4-215ENST00000515753 ZNF839A8K0R7 811 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 ACOT7O00154 380 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 PLD2O14939 933 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 PLSCR1O15162 318 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 CHGBP05060 677 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 COMTP21964 271 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 RRADP55042 308 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 SQSTM1Q13501 440 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 USP10Q14694 798 aaKnown RBP4.85□□□□□ -1.63
HERC4-215ENST00000515753 FNDC3BQ53EP0 1204 aaKnown RBP4.85□□□□□ -1.63
HERC4-215ENST00000515753 MIIPQ5JXC2 388 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.85□□□□□ -1.63
HERC4-215ENST00000515753 MTDHQ86UE4 582 aaKnown RBP4.85□□□□□ -1.63
HERC4-215ENST00000515753 PCDH19Q8TAB3 1148 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 ZNF503Q96F45 646 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 KATNBL1Q9H079 304 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 PIF1Q9H611 641 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 IPPKQ9H8X2 491 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 DSEQ9UL01 958 aa4.85□□□□□ -1.63
HERC4-215ENST00000515753 NISCHQ9Y2I1 1504 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.84□□□□□ -1.63
HERC4-215ENST00000515753 ESYT3A0FGR9 886 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 NPTXRO95502 500 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 ACO1P21399 889 aaKnown RBP4.84□□□□□ -1.63
HERC4-215ENST00000515753 RAC3P60763 192 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 TGFB2P61812 414 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 GUCY1A3Q02108 690 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 RNF151Q2KHN1 245 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 FIGNQ5HY92 759 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 SH3TC2Q8TF17 1288 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 DPYSL5Q9BPU6 564 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 CD244Q9BZW8 370 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 TRIM39Q9HCM9 518 aa4.84□□□□□ -1.63
HERC4-215ENST00000515753 GSTA4O15217 222 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 RFPL3O75679 317 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 ZNF202O95125 648 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 CRTAMO95727 393 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 GPR19Q15760 415 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 ZNF568Q3ZCX4 644 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 FAM47CQ5HY64 1035 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 Q6ZSN1 163 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 KCTD1Q719H9 257 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 C16orf59Q7L2K0 433 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 BRAPQ7Z569 592 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 REXO1L1PQ8IX06 675 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 SLC7A14Q8TBB6 771 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 FBXW5Q969U6 566 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 CARD11Q9BXL7 1154 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 CELF4Q9BZC1 486 aaKnown RBP4.83□□□□□ -1.64
HERC4-215ENST00000515753 C11orf21Q9P2W6 132 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 SRPK3Q9UPE1 567 aa4.83□□□□□ -1.64
HERC4-215ENST00000515753 TCRBV16S1A1N1A0A5B0 115 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 ZNF561-AS1K7EIQ3 104 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 NARSO43776 548 aaKnown RBP4.82□□□□□ -1.64
HERC4-215ENST00000515753 CDC14BO60729 498 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 CR2P20023 1033 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 POLD1P28340 1107 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 GJA4P35212 333 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 LACTBP83111 547 aaPredicted RBP4.82□□□□□ -1.64
HERC4-215ENST00000515753 PTH1RQ03431 593 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 ABHD18Q0P651 414 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 LSM12Q3MHD2 195 aaKnown RBP4.82□□□□□ -1.64
HERC4-215ENST00000515753 NLGN4XQ8N0W4 816 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 SH3RF2Q8TEC5 729 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 EDAQ92838 391 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 CHFRQ96EP1 664 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 SCLYQ96I15 445 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 RNPC3Q96LT9 517 aaKnown RBP4.82□□□□□ -1.64
HERC4-215ENST00000515753 OR14A2Q96R54 314 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 NDOR1Q9UHB4 597 aa4.82□□□□□ -1.64
HERC4-215ENST00000515753 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms