RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 MAP3K20Q9NYL2 800 aaKnown RBP10.32□□□□□ -0.76
CDC42SE2-212ENST00000515533 PCDHA1Q9Y5I3 950 aa10.32□□□□□ -0.76
CDC42SE2-212ENST00000515533 ATG2AQ2TAZ0 1938 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 ABHD14A-ACY1A0A1B0GW23 586 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 KLRF2D3W0D1 207 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 ZBTB5O15062 677 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 ARHGEF15O94989 841 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 HSD17B4P51659 736 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 DEFB103AP81534 67 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 PTK7Q13308 1070 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 GRB10Q13322 594 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 IKBKEQ14164 716 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 KRT40Q6A162 431 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 HOMER1Q86YM7 354 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 DHX38Q92620 1227 aaKnown RBP10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 SPATA33Q96N06 139 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 NECAB3Q96P71 396 aaPredicted RBP10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 PDCD2LQ9BRP1 358 aa10.31□□□□□ -0.76
CDC42SE2-212ENST00000515533 ERICH2A1L162 156 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 LCHNA4D1U4 455 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 SORBS3O60504 671 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 NBNO60934 754 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 PPFIA4O75335 1185 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 GJB5O95377 273 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 GGPS1O95749 300 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 CXCL10P02778 98 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 HOXA13P31271 388 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 GHRHRQ02643 423 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 GPNMBQ14956 572 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 PGM5Q15124 567 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 HSDL1Q3SXM5 330 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 STOX1Q6ZVD7 989 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 TMCO2Q7Z6W1 182 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 CCDC116Q8IYX3 515 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 ARMC2Q8NEN0 867 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 GDPD5Q8WTR4 605 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 NANOS1Q8WY41 292 aaKnown RBP10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 RAD9AQ99638 391 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 C1QTNF1Q9BXJ1 281 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 KRTAP4-8Q9BYQ9 185 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 MLXIPQ9HAP2 919 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 MTUS1Q9ULD2 1270 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 EMSYQ7Z589 1322 aa10.3□□□□□ -0.76
CDC42SE2-212ENST00000515533 C5orf42Q9H799 3197 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 MYH9P35579 1960 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 GCOM1H8Y6P7 765 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 HAS3O00219 553 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 NOP56O00567 594 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 OPLAHO14841 1288 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 IGHDP01880 384 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 POLR2MP0CAP2 368 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 TGFB3P10600 412 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 UBA1P22314 1058 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 CCND2P30279 289 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 SEC23AQ15436 765 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 CSPP1Q1MSJ5 1256 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 CELF3Q5SZQ8 465 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 ZNF618Q5T7W0 954 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 ZNF385CQ66K41 422 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 FAM117BQ6P1L5 589 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 SPRED2Q7Z698 418 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 RALYLQ86SE5 291 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 FCHSD1Q86WN1 690 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 TSC1Q92574 1164 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 TGS1Q96RS0 853 aaKnown RBP10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 LMCD1Q9NZU5 365 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 MAD2L2Q9UI95 211 aa10.29□□□□□ -0.76
CDC42SE2-212ENST00000515533 EVPLQ92817 2033 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 C17orf102A2RUQ5 167 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 LINC01553A4QN01 128 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 H3BRB1 525 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 IFIT3O14879 490 aaKnown RBP10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 LPXNO60711 386 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 LGR5O75473 907 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 AMHP03971 560 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 HOXD8P13378 290 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 THPOP40225 353 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 ZNF200P98182 395 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 GNPTABQ3T906 1256 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 XP32Q5T750 250 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 CYB5R4Q7L1T6 521 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 VSIG10LQ86VR7 867 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 MYOCDQ8IZQ8 938 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 MTMR8Q96EF0 704 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 PIGSQ96S52 555 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 LIMD1Q9UGP4 676 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 RAPGEFL1Q9UHV5 662 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 INSL6Q9Y581 213 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 KIAA1671Q9BY89 1806 aa10.28□□□□□ -0.76
CDC42SE2-212ENST00000515533 WDR81Q562E7 1941 aa10.27□□□□□ -0.76
CDC42SE2-212ENST00000515533 RSPH10B2B2RC85 870 aa10.27□□□□□ -0.77
CDC42SE2-212ENST00000515533 TRAK2O60296 914 aa10.27□□□□□ -0.77
CDC42SE2-212ENST00000515533 RSPH10BP0C881 870 aa10.27□□□□□ -0.77
CDC42SE2-212ENST00000515533 ERVK-21P61565 698 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms