RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 DPF3Q92784 378 aa5.86□□□□□ -1.47
CLDND1-228ENST00000513873 DDX17Q92841 729 aaKnown RBP5.86□□□□□ -1.47
CLDND1-228ENST00000513873 PTPRN2Q92932 1015 aa5.86□□□□□ -1.47
CLDND1-228ENST00000513873 SPON1Q9HCB6 807 aa5.86□□□□□ -1.47
CLDND1-228ENST00000513873 POGKQ9P215 609 aa5.86□□□□□ -1.47
CLDND1-228ENST00000513873 KNSTRNQ9Y448 316 aa5.86□□□□□ -1.47
CLDND1-228ENST00000513873 CLTCL1P53675 1640 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 NRXN1Q9ULB1 1477 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 PIK3C2GO75747 1445 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 SBNO2Q9Y2G9 1366 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 BLACEA4D250 179 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 ETV2O00321 342 aaPredicted RBP5.85□□□□□ -1.47
CLDND1-228ENST00000513873 MAFKO60675 156 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 PPP1R11O60927 126 aaPredicted RBP5.85□□□□□ -1.47
CLDND1-228ENST00000513873 LCP1P13796 627 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 GLDCP23378 1020 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 GPR85P60893 370 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 GABREP78334 506 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 DLG4P78352 724 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 C2orf27AQ580R0 203 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 ERICH6BQ5W0A0 696 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 STYK1Q6J9G0 422 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 MTDHQ86UE4 582 aaKnown RBP5.85□□□□□ -1.47
CLDND1-228ENST00000513873 RIOX2Q8IUF8 465 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 PLEKHO2Q8TD55 490 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 SEC14L1Q92503 715 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 ALG3Q92685 438 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 TESK2Q96S53 571 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 PRKRIP1Q9H875 184 aaPredicted RBP5.85□□□□□ -1.47
CLDND1-228ENST00000513873 FAN1Q9Y2M0 1017 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 MRPS23Q9Y3D9 190 aaKnown RBP5.85□□□□□ -1.47
CLDND1-228ENST00000513873 NUB1Q9Y5A7 615 aa5.85□□□□□ -1.47
CLDND1-228ENST00000513873 MYOCOSA0A1B0GUC4 107 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 RFXAPO00287 272 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 KRIT1O00522 736 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 KCNQ2O43526 872 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 KRT1P04264 644 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 FPR2P25090 351 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 ZNF200P98182 395 aaPredicted RBP5.84□□□□□ -1.47
CLDND1-228ENST00000513873 KCNT2Q6UVM3 1135 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLDND1-228ENST00000513873 DDX11Q96FC9 970 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 YTHDC1Q96MU7 727 aaKnown RBP5.84□□□□□ -1.47
CLDND1-228ENST00000513873 YIPF4Q9BSR8 244 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 SGPP1Q9BX95 441 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 EPB41L1Q9H4G0 881 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 RXFP1Q9HBX9 757 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 CD320Q9NPF0 282 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 CNOT6Q9ULM6 557 aaKnown RBP5.84□□□□□ -1.47
CLDND1-228ENST00000513873 IRAK3Q9Y616 596 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 X6R8D5 127 aa5.84□□□□□ -1.47
CLDND1-228ENST00000513873 SLIT2O94813 1529 aa5.84□□□□□ -1.48
CLDND1-228ENST00000513873 ADAMTS13Q76LX8 1427 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 RIMS2Q9UQ26 1411 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 TNS1Q9HBL0 1735 aaKnown RBP5.83□□□□□ -1.48
CLDND1-228ENST00000513873 FAM47E-STBD1D6RA91 191 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 ARNTLO00327 626 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 HGSO14964 777 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-228ENST00000513873 N4BP3O15049 544 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 EFCAB14O75071 495 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 SPIRE1Q08AE8 756 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 NFIXQ14938 502 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 NTRK3Q16288 839 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 LBX2Q6XYB7 198 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 EP400NLQ6ZTU2 488 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 PRRT2Q7Z6L0 340 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-228ENST00000513873 LDHDQ86WU2 507 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 LILRB2Q8N423 598 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 MZB1Q8WU39 189 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 TSPAN17Q96FV3 270 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 NDOR1Q9UHB4 597 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 MBD1Q9UIS9 605 aaPredicted RBP5.83□□□□□ -1.48
CLDND1-228ENST00000513873 PTCH2Q9Y6C5 1203 aa5.83□□□□□ -1.48
CLDND1-228ENST00000513873 PARD3Q8TEW0 1356 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 MYBBP1AQ9BQG0 1328 aaKnown RBP5.82□□□□□ -1.48
CLDND1-228ENST00000513873 GSTA4O15217 222 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 GNAT1P11488 350 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 NCAM1P13591 858 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 GRK2P25098 689 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 GRK3P35626 688 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 SLC6A11P48066 632 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 GUCY1A3Q02108 690 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 PAK1Q13153 545 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 VPS72Q15906 364 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 EZH2Q15910 746 aaKnown RBP5.82□□□□□ -1.48
CLDND1-228ENST00000513873 ZNF385BQ569K4 471 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 FOXB2Q5VYV0 432 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 STEAP3Q658P3 488 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 MILR1Q7Z6M3 343 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 NLGN1Q8N2Q7 840 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 SH3TC2Q8TF17 1288 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 EXOC2Q96KP1 924 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 SIGLEC10Q96LC7 697 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 MAGEB10Q96LZ2 347 aaPredicted RBP5.82□□□□□ -1.48
CLDND1-228ENST00000513873 CAMKK2Q96RR4 588 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 KCNJ15Q99712 375 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 CNTD2Q9H8S5 307 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 PANK3Q9H999 370 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 TERF2IPQ9NYB0 399 aa5.82□□□□□ -1.48
CLDND1-228ENST00000513873 SMG5Q9UPR3 1016 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms