RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 POTEGQ6S5H5 508 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 PLPPR4Q7Z2D5 763 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 KCNK18Q7Z418 384 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 LRRC15Q8TF66 581 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 DHX58Q96C10 678 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 TIGD1Q96MW7 591 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 NACC1Q96RE7 527 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.02□□□□□ -0.17
PDPN-210ENST00000513143 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 AZI2Q9H6S1 392 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 SPC25Q9HBM1 224 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 XPNPEP3Q9NQH7 507 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 BLOC1S4Q9NUP1 217 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 DACT1Q9NYF0 836 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 STK17AQ9UEE5 414 aa14.02□□□□□ -0.17
PDPN-210ENST00000513143 ACTN4O43707 911 aaKnown RBP14.01□□□□□ -0.17
PDPN-210ENST00000513143 STBD1O95210 358 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 PGK1P00558 417 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 LGALS2P05162 132 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 SLFN14P0C7P3 912 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 XRCC6P12956 609 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDPN-210ENST00000513143 ATP4AP20648 1035 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 SLC26A2P50443 739 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 PSMC6P62333 389 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
PDPN-210ENST00000513143 KLHL40Q2TBA0 621 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 SKOR2Q2VWA4 1001 aaPredicted RBP14.01□□□□□ -0.17
PDPN-210ENST00000513143 UTP14CQ5TAP6 766 aaKnown RBP14.01□□□□□ -0.17
PDPN-210ENST00000513143 PDXDC2PQ6P474 469 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 KLHDC9Q8NEP7 349 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 ARMC5Q96C12 935 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 C16orf70Q9BSU1 422 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 UNC93B1Q9H1C4 597 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 PAK6Q9NQU5 681 aaPredicted RBP14.01□□□□□ -0.17
PDPN-210ENST00000513143 SERTAD1Q9UHV2 236 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 DNM3Q9UQ16 869 aa14.01□□□□□ -0.17
PDPN-210ENST00000513143 KAT6AQ92794 2004 aa14□□□□□ -0.17
PDPN-210ENST00000513143 MYADML2A6NDP7 307 aa14□□□□□ -0.17
PDPN-210ENST00000513143 E9PMD0 336 aa14□□□□□ -0.17
PDPN-210ENST00000513143 KPNA6O60684 536 aa14□□□□□ -0.17
PDPN-210ENST00000513143 GABBR2O75899 941 aa14□□□□□ -0.17
PDPN-210ENST00000513143 EYA4O95677 639 aa14□□□□□ -0.17
PDPN-210ENST00000513143 C6orf222P0C671 652 aaPredicted RBP14□□□□□ -0.17
PDPN-210ENST00000513143 CCL5P13501 91 aa14□□□□□ -0.17
PDPN-210ENST00000513143 CST5P28325 142 aaPredicted RBP14□□□□□ -0.17
PDPN-210ENST00000513143 BEX3Q00994 111 aa14□□□□□ -0.17
PDPN-210ENST00000513143 MTFR1Q15390 333 aa14□□□□□ -0.17
PDPN-210ENST00000513143 XKR3Q5GH77 459 aa14□□□□□ -0.17
PDPN-210ENST00000513143 KRBA2Q6ZNG9 492 aa14□□□□□ -0.17
PDPN-210ENST00000513143 TRIM50Q86XT4 487 aa14□□□□□ -0.17
PDPN-210ENST00000513143 RAD54LQ92698 747 aa14□□□□□ -0.17
PDPN-210ENST00000513143 GLG1Q92896 1179 aa14□□□□□ -0.17
PDPN-210ENST00000513143 ZNF333Q96JL9 665 aa14□□□□□ -0.17
PDPN-210ENST00000513143 MAGEF1Q9HAY2 307 aa14□□□□□ -0.17
PDPN-210ENST00000513143 ARID2Q68CP9 1835 aa14□□□□□ -0.17
PDPN-210ENST00000513143 A0A087WWV3 80 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 ZBTB39O15060 712 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 TRAK2O60296 914 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 ZEB2O60315 1214 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 KINO60870 393 aaKnown RBP13.99□□□□□ -0.17
PDPN-210ENST00000513143 OATP04181 439 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 YWHABP31946 246 aaKnown RBP13.99□□□□□ -0.17
PDPN-210ENST00000513143 PRKCEQ02156 737 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 GNASQ5JWF2 1037 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 CCSAPQ6IQ19 270 aaPredicted RBP13.99□□□□□ -0.17
PDPN-210ENST00000513143 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 ELOA2Q8IYF1 753 aaPredicted RBP13.99□□□□□ -0.17
PDPN-210ENST00000513143 CEP57L1Q8IYX8 460 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 CNNM3Q8NE01 707 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 PIGOQ8TEQ8 1089 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 LARP4BQ92615 738 aaKnown RBP13.99□□□□□ -0.17
PDPN-210ENST00000513143 ANKEF1Q9NU02 776 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 KBTBD4Q9NVX7 518 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 ERAP1Q9NZ08 941 aa13.99□□□□□ -0.17
PDPN-210ENST00000513143 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
PDPN-210ENST00000513143 SCN10AQ9Y5Y9 1956 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 H3BRB1 525 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 F2P00734 622 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 PLA2G4BP0C869 781 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 ZNF286BP0CG31 522 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 RARRES1P49788 294 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 SLC12A3P55017 1021 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 PURAQ00577 322 aaKnown RBP13.98□□□□□ -0.17
PDPN-210ENST00000513143 MCM6Q14566 821 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 PLCB4Q15147 1175 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 LRRC41Q15345 812 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 KANK3Q6NY19 840 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 ANO5Q75V66 913 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 OTUD6AQ7L8S5 288 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 RNF180Q86T96 592 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 CKAP2LQ8IYA6 745 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 SYT2Q8N9I0 419 aaPredicted RBP13.98□□□□□ -0.17
PDPN-210ENST00000513143 ATP8B4Q8TF62 1192 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 BBXQ8WY36 941 aaPredicted RBP13.98□□□□□ -0.17
PDPN-210ENST00000513143 KAT2BQ92831 832 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 FAM167AQ96KS9 214 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 MTRQ99707 1265 aa13.98□□□□□ -0.17
PDPN-210ENST00000513143 NIFKQ9BYG3 293 aaKnown RBP13.98□□□□□ -0.17
PDPN-210ENST00000513143 RNF208Q9H0X6 261 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms