RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 MTMR7Q9Y216 660 aa9.04□□□□□ -0.96
DEPDC1B-205ENST00000512078 EXOC6BQ9Y2D4 811 aa9.04□□□□□ -0.96
DEPDC1B-205ENST00000512078 SQORQ9Y6N5 450 aa9.04□□□□□ -0.96
DEPDC1B-205ENST00000512078 MYH15Q9Y2K3 1946 aa9.04□□□□□ -0.96
DEPDC1B-205ENST00000512078 HAX1O00165 279 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 TBC1D4O60343 1298 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 SORBS3O60504 671 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 CLASP2O75122 1294 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 NR3C2P08235 984 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 GLULP15104 373 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 LAG3P18627 525 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 UBA1P22314 1058 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 CD52P31358 61 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 CCDC149Q6ZUS6 474 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 RSPH3Q86UC2 560 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 TRMT2AQ8IZ69 625 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 KDF1Q8NAX2 398 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 ATRIPQ8WXE1 791 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 TBC1D5Q92609 795 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 NELL1Q92832 810 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 USP26Q9BXU7 913 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 BOLA2Q9H3K6 86 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 C1orf115Q9H7X2 142 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 TNNQ9UQP3 1299 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 SUPT16HQ9Y5B9 1047 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 CDY2AQ9Y6F7 541 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 LAMA4Q16363 1823 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 GREB1Q4ZG55 1949 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 FRMPD2Q68DX3 1309 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 NMT2O60551 498 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 SRFP11831 508 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 EIF2AK2P19525 551 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 SARSP49591 514 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 SP2Q02086 613 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 SMC1AQ14683 1233 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 USH1GQ495M9 461 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 N4BP2L1Q5TBK1 243 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 ARHGEF16Q5VV41 709 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 LRSAM1Q6UWE0 723 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 CLASRPQ8N2M8 674 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 C12orf76Q8N812 135 aaPredicted RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 PJA1Q8NG27 643 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 CWH43Q9H720 699 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 MLXIPQ9HAP2 919 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 PXMP2Q9NR77 195 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 ARHGEF3Q9NR81 526 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 ZSCAN32Q9NX65 697 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 HCSTQ9UBK5 93 aa9.03□□□□□ -0.96
DEPDC1B-205ENST00000512078 ABCB11O95342 1321 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 HELZ2Q9BYK8 2649 aaKnown RBP9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 C2orf71A6NGG8 1288 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 TSPY2A6NKD2 308 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 TBKBP1A7MCY6 615 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 LAMTOR5O43504 91 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 LRP3O75074 770 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 SLC3A2P08195 630 aaKnown RBP9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 TGFB3P10600 412 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 ATP5JP18859 108 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 GNAT2P19087 354 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 NONOQ15233 471 aaKnown RBP eCLIP9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 KANK3Q6NY19 840 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 UNQ6494/PRO21346Q6UXR6 183 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 TMC7Q7Z402 723 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 TYW1Q9NV66 732 aaKnown RBP9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 ZNF215Q9UL58 517 aaPredicted RBP9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.02□□□□□ -0.97
DEPDC1B-205ENST00000512078 C1QTNF9BB2RNN3 333 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 IPO8O15397 1037 aaKnown RBP9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 RPLP2P05387 115 aaKnown RBP9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 IFIT2P09913 472 aaKnown RBP9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 C1QTNF9P0C862 333 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 PPM1AP35813 382 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 MRPS6P82932 125 aaKnown RBP9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 SPEM2Q0P670 501 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 HSP90AB4PQ58FF6 505 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 GPR149Q86SP6 731 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 MCF2L2Q86YR7 1114 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 IFNL3Q8IZI9 196 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 GPR152Q8TDT2 470 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 FOXQ1Q9C009 403 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 PADI3Q9ULW8 664 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 LHX6Q9UPM6 363 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 PCDHB7Q9Y5E2 793 aa9.01□□□□□ -0.97
DEPDC1B-205ENST00000512078 TAF4O00268 1085 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 NOP56O00567 594 aaKnown RBP9□□□□□ -0.97
DEPDC1B-205ENST00000512078 GPAA1O43292 621 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 HSPD1P10809 573 aaKnown RBP9□□□□□ -0.97
DEPDC1B-205ENST00000512078 PDHBP11177 359 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 PDE4AP27815 886 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 STARD6P59095 220 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 KRT17Q04695 432 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 CSTF1Q05048 431 aaKnown RBP9□□□□□ -0.97
DEPDC1B-205ENST00000512078 PPARAQ07869 468 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms