RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 BNC2Q6ZN30 1099 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 ARHGEF18Q6ZSZ5 1173 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZER1Q7Z7L7 766 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 SLFN12Q8IYM2 578 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 IPMKQ8NFU5 416 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 HLA-CQ95604 372 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 ALKBH8Q96BT7 664 aaKnown RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 HIC2Q96JB3 615 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 CITED4Q96RK1 184 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 IFT80Q9P2H3 777 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 RCAN3Q9UKA8 241 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 PCDHGC3Q9UN70 934 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 JAG2Q9Y219 1238 aa5.58□□□□□ -1.52
TRAPPC11-208ENST00000511955 SH3TC1Q8TE82 1336 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 NEURL1BA8MQ27 555 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 H0YIN7 160 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPEF1O14829 653 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 BRINP1O60477 761 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 HSPA4LO95757 839 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 PAHP00439 452 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CYP1A2P05177 515 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 PF4V1P10720 104 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ALAS1P13196 640 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 TNNT1P13805 278 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ALDH1B1P30837 517 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 KCNJ4P48050 445 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 IREB2P48200 963 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ATP1A2P50993 1020 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 GBX1Q14549 363 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPA1Q15181 289 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ABCB5Q2M3G0 1257 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ANKRD39Q53RE8 183 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 MUM1L1Q5H9M0 696 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC102BQ68D86 513 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 POMZP3Q6PJE2 187 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CNSTQ6PJW8 725 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 OLFM4Q6UX06 510 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 EPM2AIP1Q7L775 607 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 NECAB2Q7Z6G3 386 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 VSIG1Q86XK7 387 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 SYNPOQ8N3V7 929 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 TNIP2Q8NFZ5 429 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 LEO1Q8WVC0 666 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZNF606Q8WXB4 792 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 HPS3Q969F9 1004 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 DDX11Q96FC9 970 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 GMCL1Q96IK5 515 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CAPS2Q9BXY5 557 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 LMAN2LQ9H0V9 348 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 MYLK2Q9H1R3 596 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 TAOK3Q9H2K8 898 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 OSGEPQ9NPF4 335 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 TCF7L2Q9NQB0 619 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 SH3BGRL2Q9UJC5 107 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 STRIP2Q9ULQ0 834 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPT2Q9UMR5 302 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 PCDHB9Q9Y5E1 797 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 NUP98P52948 1817 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 LRRC10BA6NIK2 292 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 HSPA1AP0DMV8 641 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 HSPA1BP0DMV9 641 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 PBLDP30039 288 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 STAT1P42224 750 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 MTHFRP42898 656 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 NPTX2P47972 431 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CENPAP49450 140 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 TMPRSS15P98073 1019 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC173Q0VFZ6 552 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 SMAD4Q13485 552 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 TNIP1Q15025 636 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 SYCP1Q15431 976 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC178Q5BJE1 867 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 OLFML1Q6UWY5 402 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC149Q6ZUS6 474 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC116Q8IYX3 515 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZNF540Q8NDQ6 660 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 KCTD13Q8WZ19 329 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 CFAP36Q96G28 342 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 FSD1Q9BTV5 496 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 MMTAG2Q9BU76 263 aaKnown RBP5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ISCA1Q9BUE6 129 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 BRIP1Q9BX63 1249 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 SRCIN1Q9C0H9 1055 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 NYXQ9GZU5 481 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 OSBPL3Q9H4L5 887 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 BCORQ6W2J9 1755 aa5.57□□□□□ -1.52
TRAPPC11-208ENST00000511955 ATP10DQ9P241 1426 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ARFGEF2Q9Y6D5 1785 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 UQCRHLA0A096LP55 91 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 OPLAHO14841 1288 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZBTB7BO15156 539 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 KPNA6O60684 536 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 CYP11A1P05108 521 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 APOA4P06727 396 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 UQCRHP07919 91 aa5.56□□□□□ -1.52
TRAPPC11-208ENST00000511955 YBX3P16989 372 aaKnown RBP eCLIP5.56□□□□□ -1.523e-7■■□□□ 12.8
TRAPPC11-208ENST00000511955 PHKA1P46020 1223 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms