RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SNAP23O00161 211 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SLC9A3R1O14745 358 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 N4BP3O15049 544 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 EPB41L2O43491 1005 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TADA2AO75478 443 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ITGA4P13612 1032 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 IRS1P35568 1242 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ARID5AQ03989 594 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SIGLEC14Q08ET2 396 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PTGDRQ13258 359 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SURF1Q15526 300 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CCL14Q16627 93 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SLC45A4Q5BKX6 768 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PPM1LQ5SGD2 360 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CTR9Q6PD62 1173 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 POTEBQ6S5H4 581 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 KCTD1Q719H9 257 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SLC24A5Q71RS6 500 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SRGAP1Q7Z6B7 1085 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 GPR65Q8IYL9 337 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 REXO1Q8N1G1 1221 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 KLHDC9Q8NEP7 349 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 USP6NLQ92738 828 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 EAF2Q96CJ1 260 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SLITRK6Q9H5Y7 841 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 DCTPP1Q9H773 170 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 BRD9Q9H8M2 597 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 DDX4Q9NQI0 724 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TLR9Q9NR96 1032 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CYP39A1Q9NYL5 469 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ANAPC4Q9UJX5 808 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CYP46A1Q9Y6A2 500 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SMIM35A0A1B0GVV1 85 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 A6NJR5 290 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 H3BQV1 296 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CDC45O75419 566 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 RHOBTB1O94844 696 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 GJB5O95377 273 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SEC24BO95487 1268 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 GLUD1P00367 558 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CA3P07451 260 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 P4HA1P13674 534 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 POU3F3P20264 500 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 RASA1P20936 1047 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ITGB8P26012 769 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 RPS6P62753 249 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 SMARCB1Q12824 385 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 POSTNQ15063 836 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 XKR3Q5GH77 459 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 BTBD8Q5XKL5 378 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 ZNF746Q6NUN9 644 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TRMT11Q7Z4G4 463 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TADA2BQ86TJ2 420 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 FBXO16Q8IX29 292 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PAF1Q8N7H5 531 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 DIS3LQ8TF46 1054 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 LRCH3Q96II8 777 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CCDC136Q96JN2 1154 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 UROC1Q96N76 676 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TRAIPQ9BWF2 469 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 RANBP17Q9H2T7 1088 aaKnown RBP3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM51Q9NW97 253 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM161AQ9NX61 479 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 BTBD7Q9P203 1132 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 CCDC39Q9UFE4 941 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 GTF2IRD1Q9UHL9 959 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PRDM4Q9UKN5 801 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PCDHB8Q9UN66 801 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 USTQ9Y2C2 406 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 PCDHB13Q9Y5F0 798 aa3.18□□□□□ -1.9
CLOCK-209ENST00000511124 TYW5A2RUC4 315 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ARHGEF35A5YM69 484 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 DDX11L8A8MPP1 907 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 GPR37O15354 613 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 GFRA3O60609 400 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 HNRNPA1P09651 372 aaKnown RBP eCLIP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CTSHP09668 335 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PDCP20941 246 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SARSP49591 514 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 METAP2P50579 478 aaKnown RBP eCLIP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CLCN5P51795 746 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 EFNA5P52803 228 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 ORC2Q13416 577 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CELF3Q5SZQ8 465 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 FAM126BQ8IXS8 530 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SRBD1Q8N5C6 995 aaKnown RBP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 KCNV2Q8TDN2 545 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 BICD1Q96G01 975 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 CALML4Q96GE6 196 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 RPGRIP1Q96KN7 1286 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 SPACA7Q96KW9 195 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM175Q9BSA9 504 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 TIPINQ9BVW5 301 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 R3HDMLQ9H3Y0 253 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM260Q9NX78 707 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.17□□□□□ -1.9
CLOCK-209ENST00000511124 MTUS1Q9ULD2 1270 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 PCDHA10Q9Y5I2 948 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 TMEM221A6NGB7 291 aa3.17□□□□□ -1.9
CLOCK-209ENST00000511124 M0R296 226 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms