RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ZNF528Q3MIS6 628 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 HSP90AB4PQ58FF6 505 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 CEP85Q6P2H3 762 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 OTOP3Q7RTS5 596 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 RSPH3Q86UC2 560 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 TRIM50Q86XT4 487 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 C12orf76Q8N812 135 aaPredicted RBP12.62□□□□□ -0.39
SNF8-207ENST00000509995 NETO1Q8TDF5 533 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 FRAT1Q92837 279 aaPredicted RBP12.62□□□□□ -0.39
SNF8-207ENST00000509995 USP26Q9BXU7 913 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 MLXIPQ9HAP2 919 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 PARD6AQ9NPB6 346 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 PXMP2Q9NR77 195 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
SNF8-207ENST00000509995 CA14Q9ULX7 337 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 SIT1Q9Y3P8 196 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 PCDHGA2Q9Y5H1 932 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 CDY2AQ9Y6F7 541 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 NRCAMQ92823 1304 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 MAST4O15021 2626 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 TBKBP1A7MCY6 615 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 NOP56O00567 594 aaKnown RBP12.61□□□□□ -0.39
SNF8-207ENST00000509995 PROS1P07225 676 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 TGFB3P10600 412 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 PDHBP11177 359 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 PPARAQ07869 468 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 PHLDB3Q6NSJ2 640 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 CCDC149Q6ZUS6 474 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 APPBP2Q92624 585 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 GPR20Q99678 358 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 EPC1Q9H2F5 836 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 DZANK1Q9NVP4 752 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 IGSF9Q9P2J2 1179 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 ZNF215Q9UL58 517 aaPredicted RBP12.61□□□□□ -0.39
SNF8-207ENST00000509995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNF8-207ENST00000509995 ABCB11O95342 1321 aa12.61□□□□□ -0.39
SNF8-207ENST00000509995 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
SNF8-207ENST00000509995 GLULP15104 373 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 LAG3P18627 525 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 KANK3Q6NY19 840 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 MCF2L2Q86YR7 1114 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 ATRIPQ8WXE1 791 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 TYW1Q9NV66 732 aaKnown RBP12.6□□□□□ -0.39
SNF8-207ENST00000509995 FBXO4Q9UKT5 387 aa12.6□□□□□ -0.39
SNF8-207ENST00000509995 NBEAQ8NFP9 2946 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 LAMA5O15230 3695 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 DOCK8Q8NF50 2099 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 C2orf71A6NGG8 1288 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 HSPD1P10809 573 aaKnown RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 TOP1P11387 765 aaKnown RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 MYCLP12524 364 aaPredicted RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 IBSPP21815 317 aaPredicted RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 SARSP49591 514 aaKnown RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 MRPS6P82932 125 aaKnown RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 ZNF543Q08ER8 600 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 SMC1AQ14683 1233 aaKnown RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 MRPL43Q8N983 215 aaKnown RBP12.59□□□□□ -0.39
SNF8-207ENST00000509995 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 DNAJB3Q8WWF6 145 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
SNF8-207ENST00000509995 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 PDCD2LQ9BRP1 358 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 CWH43Q9H720 699 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 ZMIZ1Q9ULJ6 1067 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 PADI3Q9ULW8 664 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 PCDHB7Q9Y5E2 793 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 SQORQ9Y6N5 450 aa12.59□□□□□ -0.39
SNF8-207ENST00000509995 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
SNF8-207ENST00000509995 M0R2C6 588 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 SRFP11831 508 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 KCNA4P22459 653 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 PAK2Q13177 524 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 RALGAPA1Q6GYQ0 2036 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 ZBTB44Q8NCP5 570 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 NAPBQ9H115 298 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 TMX1Q9H3N1 280 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 BCAS3Q9H6U6 928 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 ARHGEF3Q9NR81 526 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 TUBE1Q9UJT0 475 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 GMEB2Q9UKD1 530 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.58□□□□□ -0.4
SNF8-207ENST00000509995 IGSF9BQ9UPX0 1349 aa12.58□□□□□ -0.4
SNF8-207ENST00000509995 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.57□□□□□ -0.4
SNF8-207ENST00000509995 RANBP6O60518 1105 aaKnown RBP12.57□□□□□ -0.4
SNF8-207ENST00000509995 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
SNF8-207ENST00000509995 PDE4AP27815 886 aa12.57□□□□□ -0.4
SNF8-207ENST00000509995 PPM1AP35813 382 aa12.57□□□□□ -0.4
SNF8-207ENST00000509995 CDC37Q16543 378 aaPredicted RBP12.57□□□□□ -0.4
SNF8-207ENST00000509995 METTL7BQ6UX53 244 aa12.57□□□□□ -0.4
SNF8-207ENST00000509995 TMC5Q6UXY8 1006 aa12.57□□□□□ -0.4
SNF8-207ENST00000509995 GPR152Q8TDT2 470 aa12.57□□□□□ -0.4
SNF8-207ENST00000509995 RSAD2Q8WXG1 361 aa12.57□□□□□ -0.4
SNF8-207ENST00000509995 FOXQ1Q9C009 403 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms