RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 GNAT1P11488 350 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 CCL23P55773 120 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 IGBP1P78318 339 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 PRKCEQ02156 737 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 RBL2Q08999 1139 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 RESTQ13127 1097 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 RILPL1Q5EBL4 403 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 RUFY4Q6ZNE9 571 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 TRMT1LQ7Z2T5 733 aaKnown RBP20.45■□□□□ 0.86
NPHP4-210ENST00000506941 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 CKAP2LQ8IYA6 745 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.45■□□□□ 0.86
NPHP4-210ENST00000506941 TUBE1Q9UJT0 475 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 COLQQ9Y215 455 aaPredicted RBP20.45■□□□□ 0.86
NPHP4-210ENST00000506941 PTPRSQ13332 1948 aa20.45■□□□□ 0.86
NPHP4-210ENST00000506941 POTEMA6NI47 508 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 STX6O43752 255 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 HBP1O60381 514 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 STBD1O95210 358 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 CSF2RAP15509 400 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 EPHB4P54760 987 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 PTGDRQ13258 359 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 BFSP2Q13515 415 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 CAGE1Q8TC20 777 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 BBXQ8WY36 941 aaPredicted RBP20.44■□□□□ 0.86
NPHP4-210ENST00000506941 VWCEQ96DN2 955 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 SCLYQ96I15 445 aa20.44■□□□□ 0.86
NPHP4-210ENST00000506941 WRAP73Q9P2S5 460 aaPredicted RBP20.44■□□□□ 0.86
NPHP4-210ENST00000506941 GBF1Q92538 1859 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 RRN3P2A6NIE6 340 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 OATP04181 439 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 CKBP12277 381 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 BMP8BP34820 402 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 FPGSQ05932 587 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 EPHA7Q15375 998 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 TRAF7Q6Q0C0 670 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 CCDC155Q8N6L0 562 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 RGL1Q9NZL6 768 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 COL1A2P08123 1366 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 MICAL3Q7RTP6 2002 aa20.43■□□□□ 0.86
NPHP4-210ENST00000506941 TMEM150BA6NC51 233 aa20.42■□□□□ 0.86
NPHP4-210ENST00000506941 ZNF618Q5T7W0 954 aa20.42■□□□□ 0.86
NPHP4-210ENST00000506941 TMEM199Q8N511 208 aa20.42■□□□□ 0.86
NPHP4-210ENST00000506941 DYDC2Q96IM9 177 aa20.42■□□□□ 0.86
NPHP4-210ENST00000506941 FAM167AQ96KS9 214 aa20.42■□□□□ 0.86
NPHP4-210ENST00000506941 UBE2OQ9C0C9 1292 aaKnown RBP20.42■□□□□ 0.86
NPHP4-210ENST00000506941 TCHHQ07283 1943 aa20.42■□□□□ 0.86
NPHP4-210ENST00000506941 P4HBP07237 508 aaKnown RBP20.41■□□□□ 0.86
NPHP4-210ENST00000506941 IQCF3P0C7M6 154 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 THPOP40225 353 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 TECP42680 631 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 QARSP47897 775 aaKnown RBP20.41■□□□□ 0.86
NPHP4-210ENST00000506941 PSMC5P62195 406 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 CYP4A11Q02928 519 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 ZNF484Q5JVG2 852 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 MTHFD1LQ6UB35 978 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 C16orf59Q7L2K0 433 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 TNPO1Q92973 898 aaKnown RBP20.41■□□□□ 0.86
NPHP4-210ENST00000506941 EIF2AK1Q9BQI3 630 aaKnown RBP20.41■□□□□ 0.86
NPHP4-210ENST00000506941 LXNQ9BS40 222 aa20.41■□□□□ 0.86
NPHP4-210ENST00000506941 C22orf31O95567 290 aa20.4■□□□□ 0.86
NPHP4-210ENST00000506941 SELPP16109 830 aa20.4■□□□□ 0.86
NPHP4-210ENST00000506941 ATP2C1P98194 919 aaPredicted RBP20.4■□□□□ 0.86
NPHP4-210ENST00000506941 PPIGQ13427 754 aaKnown RBP eCLIP20.4■□□□□ 0.864e-8■■■□□ 18.9
NPHP4-210ENST00000506941 CTTNQ14247 550 aaKnown RBP20.4■□□□□ 0.86
NPHP4-210ENST00000506941 GPNMBQ14956 572 aa20.4■□□□□ 0.86
NPHP4-210ENST00000506941 IL17AQ16552 155 aa20.4■□□□□ 0.86
NPHP4-210ENST00000506941 LRRC8DQ7L1W4 858 aa20.4■□□□□ 0.86
NPHP4-210ENST00000506941 RETREG2Q8NC44 543 aa20.4■□□□□ 0.86
NPHP4-210ENST00000506941 HSD17B14Q9BPX1 270 aa20.4■□□□□ 0.86
NPHP4-210ENST00000506941 LAD1O00515 517 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 SLITRK3O94933 977 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 ACRP10323 421 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 KLRC1P26715 233 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 FXR2P51116 673 aaKnown RBP eCLIP20.39■□□□□ 0.85
NPHP4-210ENST00000506941 PKP1Q13835 747 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 MBTPS1Q14703 1052 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 XKR3Q5GH77 459 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 C9orf50Q5SZB4 431 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 TAF2Q6P1X5 1199 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 ANO5Q75V66 913 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 DNAJB3Q8WWF6 145 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 CEP89Q96ST8 783 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 SH2D3AQ9BRG2 576 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 NIFKQ9BYG3 293 aaKnown RBP20.39■□□□□ 0.85
NPHP4-210ENST00000506941 FTOQ9C0B1 505 aaKnown RBP eCLIP20.39■□□□□ 0.85
NPHP4-210ENST00000506941 IL23AQ9NPF7 189 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 NRBP2Q9NSY0 501 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 SEPT9Q9UHD8 586 aaPredicted RBP20.39■□□□□ 0.85
NPHP4-210ENST00000506941 PCDHA2Q9Y5H9 948 aa20.39■□□□□ 0.85
NPHP4-210ENST00000506941 CTSHP09668 335 aa20.38■□□□□ 0.85
NPHP4-210ENST00000506941 PRPHP41219 470 aa20.38■□□□□ 0.85
NPHP4-210ENST00000506941 TARBP2Q15633 366 aaKnown RBP20.38■□□□□ 0.85
NPHP4-210ENST00000506941 PLA2G4FQ68DD2 849 aa20.38■□□□□ 0.85
NPHP4-210ENST00000506941 RPAINQ86UA6 219 aa20.38■□□□□ 0.85
NPHP4-210ENST00000506941 OSBPL7Q9BZF2 842 aa20.38■□□□□ 0.85
NPHP4-210ENST00000506941 FAM49AQ9H0Q0 323 aaPredicted RBP20.38■□□□□ 0.85
NPHP4-210ENST00000506941 DDX11L8A8MPP1 907 aa20.37■□□□□ 0.85
NPHP4-210ENST00000506941 ZBTB39O15060 712 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms