RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 C9orf50Q5SZB4 431 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
DSP-203ENST00000506617 KCTD17Q8N5Z5 321 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 IGSF22Q8N9C0 903 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
DSP-203ENST00000506617 GJA10Q969M2 543 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 SCLYQ96I15 445 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 AK8Q96MA6 479 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 SMARCAD1Q9H4L7 1026 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 ERAP1Q9NZ08 941 aa16.62■□□□□ 0.25
DSP-203ENST00000506617 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
DSP-203ENST00000506617 TET1Q8NFU7 2136 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 IGKV6D-21A0A0A0MT36 114 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 TXKP42681 527 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 SLC26A2P50443 739 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 PPIGQ13427 754 aaKnown RBP eCLIP16.61■□□□□ 0.254e-9■□□□□ 9.4
DSP-203ENST00000506617 BFSP2Q13515 415 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 ABHD15Q6UXT9 468 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 CCDC60Q8IWA6 550 aaPredicted RBP16.61■□□□□ 0.25
DSP-203ENST00000506617 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 WNT8BQ93098 351 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 AZI2Q9H6S1 392 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 PCDHA10Q9Y5I2 948 aa16.61■□□□□ 0.25
DSP-203ENST00000506617 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 SPTLC2O15270 562 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 TREHO43280 583 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 MUTP22033 750 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
DSP-203ENST00000506617 STAT5BP51692 787 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 PTK7Q13308 1070 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 STK38Q15208 465 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 EPHA7Q15375 998 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 SHHQ15465 462 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 PLPPR4Q7Z2D5 763 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 CCDC155Q8N6L0 562 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
DSP-203ENST00000506617 CAGE1Q8TC20 777 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 AFAP1L1Q8TED9 768 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 ATP6V0A1Q93050 837 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 UNC45AQ9H3U1 944 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 DISC1Q9NRI5 854 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 SETD4Q9NVD3 440 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
DSP-203ENST00000506617 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
DSP-203ENST00000506617 SIP14410 1827 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 BACH1O14867 736 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 PSAPP07602 524 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 ACRP10323 421 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
DSP-203ENST00000506617 RBL2Q08999 1139 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 PLCB4Q15147 1175 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
DSP-203ENST00000506617 SERINC5Q86VE9 423 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 KRI1Q8N9T8 703 aaKnown RBP16.59■□□□□ 0.25
DSP-203ENST00000506617 RETREG2Q8NC44 543 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 ERMNQ8TAM6 284 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.59■□□□□ 0.254e-13■■□□□ 12.8
DSP-203ENST00000506617 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
DSP-203ENST00000506617 IL23AQ9NPF7 189 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 ZNF302Q9NR11 478 aa16.59■□□□□ 0.25
DSP-203ENST00000506617 FBXO2Q9UK22 296 aaPredicted RBP16.59■□□□□ 0.25
DSP-203ENST00000506617 CHMP2AO43633 222 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.24
DSP-203ENST00000506617 IQCF3P0C7M6 154 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 GNAT1P11488 350 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 TECP42680 631 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 ADAM17P78536 824 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 GRIK4Q16099 956 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 IL17AQ16552 155 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 CSPP1Q1MSJ5 1256 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 FAM160B1Q5W0V3 765 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 C16orf59Q7L2K0 433 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 TNPO1Q92973 898 aaKnown RBP16.58■□□□□ 0.24
DSP-203ENST00000506617 HSD17B14Q9BPX1 270 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 LRWD1Q9UFC0 647 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 TRPC6Q9Y210 931 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 MAFBQ9Y5Q3 323 aaPredicted RBP16.58■□□□□ 0.24
DSP-203ENST00000506617 NRCAMQ92823 1304 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 EVPLQ92817 2033 aa16.58■□□□□ 0.24
DSP-203ENST00000506617 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
DSP-203ENST00000506617 CUTAO60888 179 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 LYPLA2O95372 231 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
DSP-203ENST00000506617 CKBP12277 381 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 SELPP16109 830 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 IGBP1P78318 339 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 CEBPZQ03701 1054 aaKnown RBP16.57■□□□□ 0.24
DSP-203ENST00000506617 LRIT3Q3SXY7 679 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 TMEM240Q5SV17 173 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 HAUS3Q68CZ6 603 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 SWSAP1Q6NVH7 229 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 PDXDC2PQ6P474 469 aa16.57■□□□□ 0.24
DSP-203ENST00000506617 PSRC1Q6PGN9 363 aaPredicted RBP16.57■□□□□ 0.24
DSP-203ENST00000506617 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms