RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TUBE1Q9UJT0 475 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 COLQQ9Y215 455 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-220ENST00000505005 PCDHA2Q9Y5H9 948 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 TMEM265A0A087WTH1 108 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 ABHD14A-ACY1A0A1B0GW23 586 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 MBLAC1A4D2B0 266 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 SLC26A4O43511 780 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 INSRRP14616 1297 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 PRPHP41219 470 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 NR5A1Q13285 461 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 HABP4Q5JVS0 413 aaKnown RBP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 MCTP1Q6DN14 999 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 CCDC43Q96MW1 224 aaKnown RBP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 MAP7D2Q96T17 732 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 FTHL17Q9BXU8 183 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 PPP1R12CQ9BZL4 782 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 INO80BQ9C086 356 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
NR1I3-220ENST00000505005 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 GABBR1Q9UBS5 961 aa11.07□□□□□ -0.64
NR1I3-220ENST00000505005 TNRC18O15417 2968 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-220ENST00000505005 CEP290O15078 2479 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 DDX39AO00148 427 aaKnown RBP11.06□□□□□ -0.64
NR1I3-220ENST00000505005 TDP2O95551 362 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 CYP2C9P11712 490 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 CKBP12277 381 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 THPOP40225 353 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 KCNJ6P48051 423 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 ADAM17P78536 824 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 SMAD3P84022 425 aaKnown RBP11.06□□□□□ -0.64
NR1I3-220ENST00000505005 IKBKEQ14164 716 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 PLCB4Q15147 1175 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 FAM26DQ5JW98 314 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 ARL6IP4Q66PJ3 421 aaKnown RBP11.06□□□□□ -0.64
NR1I3-220ENST00000505005 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 SH3RF1Q7Z6J0 888 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 C4orf19Q8IY42 314 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 RSPH1Q8WYR4 309 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 HERVK_113Q902F9 699 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 SEPT8Q92599 483 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 RNPC3Q96LT9 517 aaKnown RBP11.06□□□□□ -0.64
NR1I3-220ENST00000505005 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
NR1I3-220ENST00000505005 TTC12Q9H892 705 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-220ENST00000505005 SETD4Q9NVD3 440 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 IGSF9BQ9UPX0 1349 aa11.06□□□□□ -0.64
NR1I3-220ENST00000505005 ASAP2O43150 1006 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 SORBS3O60504 671 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 LYPLA2O95372 231 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 CCNE2O96020 404 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 OATP04181 439 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 OR52Z1P0C646 297 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 CSF2RAP15509 400 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 CYP2C18P33260 490 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 ANP32AP39687 249 aaKnown RBP11.05□□□□□ -0.64
NR1I3-220ENST00000505005 RFC5P40937 340 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 TBC1D8BQ0IIM8 1120 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 PCBP1Q15365 356 aaKnown RBP eCLIP11.05□□□□□ -0.64
NR1I3-220ENST00000505005 RAB30Q15771 203 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 B3GNT9Q6UX72 402 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 CCDC60Q8IWA6 550 aaPredicted RBP11.05□□□□□ -0.64
NR1I3-220ENST00000505005 LMBR1Q8WVP7 490 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 TCP11Q8WWU5 503 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 SLC7A3Q8WY07 619 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 SLC9A7Q96T83 725 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 UNC45AQ9H3U1 944 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 TUFT1Q9NNX1 390 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 SLC4A7Q9Y6M7 1214 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
NR1I3-220ENST00000505005 CARNS1A5YM72 827 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 TREHO43280 583 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 CHMP2AO43633 222 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 CXCL10P02778 98 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 KLRC1P26715 233 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 MARK3P27448 753 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 MCM7P33993 719 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 TXKP42681 527 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 CCL23P55773 120 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 ST3GAL1Q11201 340 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 ATL3Q6DD88 541 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 FAM109BQ6ICB4 259 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-220ENST00000505005 MTHFD1LQ6UB35 978 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-220ENST00000505005 AK8Q96MA6 479 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 NACC1Q96RE7 527 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 PCYT2Q99447 389 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 ANKEF1Q9NU02 776 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 MSRAQ9UJ68 235 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 MKI67P46013 3256 aaKnown RBP11.04□□□□□ -0.64
NR1I3-220ENST00000505005 DOCK5Q9H7D0 1870 aa11.04□□□□□ -0.64
NR1I3-220ENST00000505005 TRIP12Q14669 1992 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-220ENST00000505005 LTBP2Q14767 1821 aa11.03□□□□□ -0.64
NR1I3-220ENST00000505005 GPR182O15218 404 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms