RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 RACK1P63244 317 aaKnown RBP3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 NCAPHQ15003 741 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 SYNE4Q8N205 404 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 KREMEN2Q8NCW0 462 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 ZDHHC5Q9C0B5 715 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 GINM1Q9NU53 330 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 EFR3BQ9Y2G0 817 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 COX11Q9Y6N1 276 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 TRAF5O00463 557 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 HMGCRP04035 888 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 SPIRE1Q08AE8 756 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 PAK2Q13177 524 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 TUSC3Q13454 348 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 PCOLCEQ15113 449 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 PPP2R5EQ16537 467 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 OTOP3Q7RTS5 596 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 C9orf106Q8NAJ2 232 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 UHMK1Q8TAS1 419 aaKnown RBP3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 PIP4K2CQ8TBX8 421 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 SCARB1Q8WTV0 552 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 CFHR4Q92496 578 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 RNF7Q9UBF6 113 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 NPFFR2Q9Y5X5 522 aa3.52□□□□□ -1.85
HMGB3P17-201ENST00000504195 SCAMP3O14828 347 aaKnown RBP3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 KIAA0355O15063 1070 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 KCNJ6P48051 423 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 EPHA5P54756 1037 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 CNGB1Q14028 1251 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 NOLC1Q14978 699 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 PTPAQ15257 358 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 WDR72Q3MJ13 1102 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 MRGPREQ86SM8 312 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 VRK3Q8IV63 474 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 ZNF366Q8N895 744 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 SPATA3Q8NHX4 192 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 CPLX3Q8WVH0 158 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 BTN2A2Q8WVV5 523 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 GPRASP2Q96D09 838 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 OR10A2Q9H208 303 aa3.51□□□□□ -1.85
HMGB3P17-201ENST00000504195 TTBK1Q5TCY1 1321 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 MYADML2A6NDP7 307 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 LCP1P13796 627 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 SLC25A3Q00325 362 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 LY6G5CQ5SRR4 150 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 TMCO4Q5TGY1 634 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 SP5Q6BEB4 398 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 OLFML1Q6UWY5 402 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 RASGRP4Q8TDF6 673 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 NELL1Q92832 810 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 LENG9Q96B70 501 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 CDIP1Q9H305 208 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 RSAD1Q9HA92 442 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 GPR27Q9NS67 375 aa3.5□□□□□ -1.85
HMGB3P17-201ENST00000504195 SLC26A4O43511 780 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 MEOX1P50221 254 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 EIF4HQ15056 248 aaKnown RBP3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 TBR1Q16650 682 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 HECTD2Q5U5R9 776 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 SPTY2D1Q68D10 685 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 GPR135Q8IZ08 494 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 SHCBP1Q8NEM2 672 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 SLC25A43Q8WUT9 341 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 MIEF2Q96C03 454 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 TMEM176AQ96HP8 235 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 TOR3AQ9H497 397 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 LRP2BPQ9P2M1 347 aa3.49□□□□□ -1.85
HMGB3P17-201ENST00000504195 RECKO95980 971 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 GNAT1P11488 350 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 VAMP1P23763 118 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 NASPP49321 788 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 MAN2A2P49641 1150 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 GFRA1P56159 465 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 TAP1Q03518 808 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 DBPQ10586 325 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 TRIM68Q6AZZ1 485 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 RSPO2Q6UXX9 243 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 KCTD1Q719H9 257 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 ZC3H7AQ8IWR0 971 aaKnown RBP3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 GSPT2Q8IYD1 628 aaKnown RBP3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 PROKR1Q8TCW9 393 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 WASF1Q92558 559 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 SHDQ96IW2 340 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 JAM3Q9BX67 310 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 R3HDMLQ9H3Y0 253 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 DSEQ9UL01 958 aa3.48□□□□□ -1.85
HMGB3P17-201ENST00000504195 ZBTB7CA1YPR0 619 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 B3GALT2O43825 422 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 ABHD16AO95870 558 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 PDE6AP16499 860 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 GJA8P48165 433 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 KCNQ1P51787 676 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 PRSS53Q2L4Q9 553 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 SV2CQ496J9 727 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 PRR16Q569H4 304 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 SLC35F1Q5T1Q4 408 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 KCNV1Q6PIU1 500 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 RHOUQ7L0Q8 258 aa3.47□□□□□ -1.85
HMGB3P17-201ENST00000504195 METTL16Q86W50 562 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms