RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ANKS4BQ8N8V4 417 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MLKLQ8NB16 471 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PROCA1Q8NCQ7 364 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 WDR66Q8TBY9 1149 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SLC5A5Q92911 643 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 VTI1AQ96AJ9 217 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 LRRC45Q96CN5 670 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CYP2S1Q96SQ9 504 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SENP2Q9HC62 589 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TMEM45AQ9NWC5 275 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 AIPL1Q9NZN9 384 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 NEU3Q9UQ49 428 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TBC1D30Q9Y2I9 924 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CAPN7Q9Y6W3 813 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 GOLGA6BA6NDN3 693 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 C9IYK1 514 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 KIAA0391O15091 583 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CUTAO60888 179 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 FMNL1O95466 1100 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 IMPDH2P12268 514 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 ATF3P18847 181 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 RPS6KA3P51812 740 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 GJA9P57773 515 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 STIM1Q13586 685 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TSNAXIP1Q2TAA8 658 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MCMDC2Q4G0Z9 681 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 GKAP1Q5VSY0 366 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM59Q8IWR1 403 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CLASRPQ8N2M8 674 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SMC1BQ8NDV3 1235 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MICAL1Q8TDZ2 1067 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PGAP3Q96FM1 320 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 BICD1Q96G01 975 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PGBD1Q96JS3 809 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SPAG5Q96R06 1193 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MTFR1LQ9H019 292 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 NSRP1Q9H0G5 558 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SLC38A10Q9HBR0 1119 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM39Q9HCM9 518 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TSKSQ9UJT2 592 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 RIMKLBQ9ULI2 386 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CORO1CQ9ULV4 474 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MAFFQ9ULX9 164 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TMCO1Q9UM00 188 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SIK3Q9Y2K2 1263 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 LUC7L2Q9Y383 392 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 HCN4Q9Y3Q4 1203 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 RPS6KL1Q9Y6S9 549 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 EIF3HO15372 352 aaKnown RBP eCLIP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PSMD10O75832 226 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SELPP16109 830 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TCP1P17987 556 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 JAM2P57087 298 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 RPS8P62241 208 aaKnown RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 KLHL10Q6JEL2 608 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CD300LGQ6UXG3 332 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM50Q86XT4 487 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 KLHL23Q8NBE8 558 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 FBXO36Q8NEA4 188 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 SP7Q8TDD2 431 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CLEC4DQ8WXI8 215 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 DNAJC25Q9H1X3 360 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CNNM2Q9H8M5 875 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 FAM204AQ9H8W3 233 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 KLC4Q9NSK0 619 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 CEP131Q9UPN4 1083 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 NAALADL1Q9UQQ1 740 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 PARP3Q9Y6F1 533 aa3.07□□□□□ -1.92
NEDD4-204ENST00000503468 MROH7Q68CQ1 1323 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 SLC27A2O14975 620 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 SERPINC1P01008 464 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 TROVE2P10155 538 aaKnown RBP eCLIP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 GHRP10912 638 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 EPB41P11171 864 aaKnown RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 VAMP1P23763 118 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 COPB2P35606 906 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 KRT83P78385 493 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 INCA1Q0VD86 236 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 ADCK5Q3MIX3 580 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 APBB1IPQ7Z5R6 666 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 C17orf53Q8N3J3 647 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 GUF1Q8N442 669 aaKnown RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 CRACR2BQ8N4Y2 399 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 ADAMTS19Q8TE59 1207 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 SLC39A13Q96H72 371 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 PPP1R13BQ96KQ4 1090 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 NAPGQ99747 312 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 BAG1Q99933 345 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 JPH2Q9BR39 696 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 TRMT1Q9NXH9 659 aaKnown RBP3.06□□□□□ -1.92
NEDD4-204ENST00000503468 COPG2Q9UBF2 871 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 ANKRD6Q9Y2G4 727 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 PCDHA8Q9Y5H6 950 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 MRFAP1Q9Y605 127 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 KRT86O43790 486 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 CNTN5O94779 1100 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 DESP17661 470 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 STT3AP46977 705 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 ARSEP51690 589 aa3.06□□□□□ -1.92
NEDD4-204ENST00000503468 LACTBP83111 547 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms