RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	C17orf102	A2RUQ5	167 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810		H3BRB1	525 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	PRPF3	O43395	683 aa	Known RBP	12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	PPFIA4	O75335	1185 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	CDKL5	O76039	1030 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	FGB	P02675	491 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	PFKM	P08237	780 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	PDIA3	P30101	505 aa	Known RBP	12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	WNT7B	P56706	349 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	NLRP5	P59047	1200 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	SP2	Q02086	613 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	TOB2	Q14106	344 aa	Predicted RBP	12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	ANKRD1	Q15327	319 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	MCTP2	Q6DN12	878 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	DESI1	Q6ICB0	168 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	GDF6	Q6KF10	455 aa	Predicted RBP	12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	ZNF365	Q70YC5	407 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810		Q7L0L9	218 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	TEX2	Q8IWB9	1127 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	PRR7	Q8TB68	274 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	KAT2B	Q92831	832 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	GLG1	Q92896	1179 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	AGXT2	Q9BYV1	514 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	WNT8A	Q9H1J5	351 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	TUT1	Q9H6E5	874 aa	Known RBP	12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	TMEM260	Q9NX78	707 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	HDAC6	Q9UBN7	1215 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	GTF2IRD1	Q9UHL9	959 aa		12.15	□□□□□ -0.46
CDK11A-222	ENST00000498810	GNAT1	P11488	350 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	IFNAR1	P17181	557 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	RFC2	P35250	354 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	TCF7	P36402	384 aa	Predicted RBP	12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	ANAPC15	P60006	121 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	SMAD3	P84022	425 aa	Known RBP	12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	PTPRN	Q16849	979 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	TMEM240	Q5SV17	173 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	ZNF787	Q6DD87	383 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	OTOP2	Q7RTS6	562 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	SESTD1	Q86VW0	696 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	TRIM50	Q86XT4	487 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	FBXL16	Q8N461	479 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	AFAP1L1	Q8TED9	768 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	ATP6V0A1	Q93050	837 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	MRGPRX2	Q96LB1	330 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	GPR20	Q99678	358 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	SENP7	Q9BQF6	1050 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	SLK	Q9H2G2	1235 aa	Predicted RBP	12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	AZI2	Q9H6S1	392 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	JPH1	Q9HDC5	661 aa	Predicted RBP	12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	JADE2	Q9NQC1	790 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	VPS54	Q9P1Q0	977 aa		12.14	□□□□□ -0.47
CDK11A-222	ENST00000498810	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	ESYT2	A0FGR8	921 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	DDX39A	O00148	427 aa	Known RBP	12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	SMIM10L2A	P0DMW4	78 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	SMIM10L2B	P0DMW5	78 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	XBP1	P17861	261 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	MARK3	P27448	753 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	ARHGAP4	P98171	946 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	SEMA3F	Q13275	785 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	LRRC8D	Q7L1W4	858 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	CRIPAK	Q8N1N5	446 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	ZNF274	Q96GC6	653 aa	Predicted RBP	12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	MXRA8	Q9BRK3	442 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	AAAS	Q9NRG9	546 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	SLC9A2	Q9UBY0	812 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	MSRA	Q9UJ68	235 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	UBIAD1	Q9Y5Z9	338 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	SLC4A7	Q9Y6M7	1214 aa		12.13	□□□□□ -0.47
CDK11A-222	ENST00000498810	MAFG	O15525	162 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	DEXI	O95424	95 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	CCNYL3	P0C7X3	344 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	HOXD8	P13378	290 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	SELP	P16109	830 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	KCNA2	P16389	499 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	ITGB5	P18084	799 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	SREBF1	P36956	1147 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	THPO	P40225	353 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	KCNJ6	P48051	423 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	SET	Q01105	290 aa	Predicted RBP	12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	PTK7	Q13308	1070 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	CEP55	Q53EZ4	464 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	PLA2G4D	Q86XP0	818 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	SNIP1	Q8TAD8	396 aa	Known RBP	12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	SEPT1	Q8WYJ6	367 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	ZMYND12	Q9H0C1	365 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	KCNH7	Q9NS40	1196 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	EVA1B	Q9NVM1	165 aa		12.12	□□□□□ -0.47
CDK11A-222	ENST00000498810	WDR81	Q562E7	1941 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	TTC24	A2A3L6	582 aa	Predicted RBP	12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	HAS3	O00219	553 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	BACH1	O14867	736 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	PARN	O95453	639 aa	Known RBP	12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	CTSH	P09668	335 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	IQCF3	P0C7M6	154 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	RAB30	Q15771	203 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	RASGRP4	Q8TDF6	673 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	HERVK_113	Q902F9	699 aa		12.11	□□□□□ -0.47
CDK11A-222	ENST00000498810	TNPO1	Q92973	898 aa	Known RBP	12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms