RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
C4A-258ENST00000496659 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
C4A-258ENST00000496659 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
C4A-258ENST00000496659 RGL1Q9NZL6 768 aa11.14□□□□□ -0.63
C4A-258ENST00000496659 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
C4A-258ENST00000496659 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
C4A-258ENST00000496659 PPME1Q9Y570 386 aa11.14□□□□□ -0.63
C4A-258ENST00000496659 IGKV6D-21A0A0A0MT36 114 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 ARHGEF35A5YM69 484 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
C4A-258ENST00000496659 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
C4A-258ENST00000496659 PPFIA4O75335 1185 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 LGR5O75473 907 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 SLITRK3O94933 977 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 EYA4O95677 639 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 SPATA31C1P0DKV0 1188 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 YWHABP31946 246 aaKnown RBP11.13□□□□□ -0.63
C4A-258ENST00000496659 STAT5BP51692 787 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 PRKCEQ02156 737 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 XKR3Q5GH77 459 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 PLPPR4Q7Z2D5 763 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 CCDC60Q8IWA6 550 aaPredicted RBP11.13□□□□□ -0.63
C4A-258ENST00000496659 AFG1LQ8WV93 481 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 CCDC47Q96A33 483 aaKnown RBP11.13□□□□□ -0.63
C4A-258ENST00000496659 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 PLIN2Q99541 437 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 KATNAL1Q9BW62 490 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 PANK2Q9BZ23 570 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 ANKEF1Q9NU02 776 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 ERAP1Q9NZ08 941 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 KCND2Q9NZV8 630 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 SERTAD1Q9UHV2 236 aa11.13□□□□□ -0.63
C4A-258ENST00000496659 DBR1Q9UK59 544 aaKnown RBP11.13□□□□□ -0.63
C4A-258ENST00000496659 LOXHD1Q8IVV2 1947 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 A0A087X0B3 334 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 GSTTP1A0A1W2PQM5 241 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 A6NJR5 290 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 SMC2O95347 1197 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 OATP04181 439 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 LGALS2P05162 132 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
C4A-258ENST00000496659 KRT18P05783 430 aaKnown RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 C6orf222P0C671 652 aaPredicted RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 PLA2G4BP0C869 781 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 HOXD8P13378 290 aaPredicted RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 CCND3P30281 292 aaPredicted RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 GJA9P57773 515 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 TRIM32Q13049 653 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 POSTNQ15063 836 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 FSCN1Q16658 493 aaKnown RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 LONRF3Q496Y0 759 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 GJC2Q5T442 439 aaPredicted RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 EXOC8Q8IYI6 725 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 TRPV1Q8NER1 839 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 NRBP2Q9NSY0 501 aa11.12□□□□□ -0.63
C4A-258ENST00000496659 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 MAFBQ9Y5Q3 323 aaPredicted RBP11.12□□□□□ -0.63
C4A-258ENST00000496659 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 TRIOBPQ9H2D6 2365 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 E9PMD0 336 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
C4A-258ENST00000496659 CCL5P13501 91 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
C4A-258ENST00000496659 NKX3-2P78367 333 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 UGCGQ16739 394 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 RNF180Q86T96 592 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 SYT2Q8N9I0 419 aaPredicted RBP11.11□□□□□ -0.63
C4A-258ENST00000496659 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
C4A-258ENST00000496659 ATP8B4Q8TF62 1192 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 JPH2Q9BR39 696 aaPredicted RBP11.11□□□□□ -0.63
C4A-258ENST00000496659 TIPINQ9BVW5 301 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 GTPBP4Q9BZE4 634 aaKnown RBP11.11□□□□□ -0.63
C4A-258ENST00000496659 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.11□□□□□ -0.63
C4A-258ENST00000496659 UNC93B1Q9H1C4 597 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 BHMT2Q9H2M3 363 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 BLOC1S4Q9NUP1 217 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 KBTBD4Q9NVX7 518 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
C4A-258ENST00000496659 ADCY6O43306 1168 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 HBP1O60381 514 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 TBCAO75347 108 aaKnown RBP11.1□□□□□ -0.63
C4A-258ENST00000496659 MYL3P08590 195 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 RFC5P40937 340 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 AFMP43652 599 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 DHX8Q14562 1220 aaKnown RBP11.1□□□□□ -0.63
C4A-258ENST00000496659 MCM6Q14566 821 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 CAMK4Q16566 473 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 ECM1Q16610 540 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 NAALADL2Q58DX5 795 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 XKR9Q5GH70 373 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 GPBP1Q86WP2 473 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 ARRDC4Q8NCT1 418 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 PIGOQ8TEQ8 1089 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 SMARCE1Q969G3 411 aa11.1□□□□□ -0.63
C4A-258ENST00000496659 LENG1Q96BZ8 264 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms