RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 GCFC2P16383 781 aaKnown RBP18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 IGBP1P78318 339 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 MGAT3Q09327 533 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 MKRN4PQ13434 485 aaPredicted RBP18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 TRIM29Q14134 588 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 C8orf76Q96K31 380 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 BRMS1Q9HCU9 246 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 GABBR1Q9UBS5 961 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 GBF1Q92538 1859 aa18.22■□□□□ 0.51
DNMT3A-215ENST00000496570 RRN3P2A6NIE6 340 aa18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 CHMP2AO43633 222 aa18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 CHRNA1P02708 482 aa18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 CTSHP09668 335 aa18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 SFNP31947 248 aa18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 PBX2P40425 430 aa18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 TAF2Q6P1X5 1199 aa18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 FTOQ9C0B1 505 aaKnown RBP eCLIP18.21■□□□□ 0.51
DNMT3A-215ENST00000496570 MYH9P35579 1960 aaKnown RBP18.21■□□□□ 0.5
DNMT3A-215ENST00000496570 KIF28PB7ZC32 967 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 EML1O00423 815 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 TBX3O15119 743 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 HBP1O60381 514 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 STBD1O95210 358 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 JAK3P52333 1124 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 SPIRE1Q08AE8 756 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 MTHFD1LQ6UB35 978 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 DEFB123Q8N688 67 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 RDM1Q8NG50 284 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 DNAJB3Q8WWF6 145 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 BBXQ8WY36 941 aaPredicted RBP18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 PBX4Q9BYU1 374 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 TTYH1Q9H313 450 aaPredicted RBP18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 SAMM50Q9Y512 469 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 PCDHA2Q9Y5H9 948 aa18.2■□□□□ 0.5
DNMT3A-215ENST00000496570 COL1A2P08123 1366 aa18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 MCM2P49736 904 aa18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 PPP2R5CQ13362 524 aa18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 PLEKHG4Q58EX7 1191 aa18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 CNKSR3Q6P9H4 555 aa18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 MIER3Q7Z3K6 550 aa18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 SLC4A7Q9Y6M7 1214 aa18.19■□□□□ 0.5
DNMT3A-215ENST00000496570 ZBBXA8MT70 800 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 BAIAP3O94812 1187 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 C22orf31O95567 290 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 ACTN1P12814 892 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 DNAJB2P25686 324 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 KLRC1P26715 233 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 PRKCEQ02156 737 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 ZNF484Q5JVG2 852 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 FAM184AQ8NB25 1140 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 DBF4BQ8NFT6 615 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 TNPO1Q92973 898 aaKnown RBP18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 CEP89Q96ST8 783 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 MTIF3Q9H2K0 278 aaKnown RBP18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 FOXP1Q9H334 677 aaPredicted RBP18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 MTMR10Q9NXD2 777 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 TCEAL9Q9UHQ7 104 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 YBX2Q9Y2T7 364 aaKnown RBP18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 CHD7Q9P2D1 2997 aa18.18■□□□□ 0.5
DNMT3A-215ENST00000496570 SMIM35A0A1B0GVV1 85 aa18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 OATP04181 439 aa18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 RABGGTBP53611 331 aa18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 WDR5P61964 334 aaKnown RBP18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 TRMT1LQ7Z2T5 733 aaKnown RBP18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 KIAA0319LQ8IZA0 1049 aa18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 LINC01465Q8N7H1 131 aa18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 MTMR9Q96QG7 549 aa18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 FAM49AQ9H0Q0 323 aaPredicted RBP18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 WRAP73Q9P2S5 460 aaPredicted RBP18.17■□□□□ 0.5
DNMT3A-215ENST00000496570 MICAL3Q7RTP6 2002 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 TMEM150BA6NC51 233 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 MYOGP15173 224 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 ATP2A2P16615 1042 aaKnown RBP18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 U2AF2P26368 475 aaKnown RBP eCLIP18.16■□□□□ 0.53e-6■□□□□ 10
DNMT3A-215ENST00000496570 DEFB103AP81534 67 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 MRPS6P82932 125 aaKnown RBP18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 LPIN1Q14693 890 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 SAFBQ15424 915 aaKnown RBP eCLIP18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 TARBP2Q15633 366 aaKnown RBP18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 TMCO2Q7Z6W1 182 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 NOSTRINQ8IVI9 506 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 CKAP2LQ8IYA6 745 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 GUCD1Q96NT3 240 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 TMEM60Q9H2L4 133 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 SEMA6BQ9H3T3 888 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 CDY2AQ9Y6F7 541 aa18.16■□□□□ 0.5
DNMT3A-215ENST00000496570 ABHD14A-ACY1A0A1B0GW23 586 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 GJB2P29033 226 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 CUL4AQ13619 759 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 FBXO47Q5MNV8 452 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 PHOSPHO2Q8TCD6 241 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 FAM167AQ96KS9 214 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 FAM161BQ96MY7 647 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 SLC9A7Q96T83 725 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 COL6A3P12111 3177 aa18.15■□□□□ 0.5
DNMT3A-215ENST00000496570 EVPLQ92817 2033 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms