RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 SIX5Q8N196 739 aa8.82□□□□□ -1
CRNKL1-205ENST00000496549 EIF1ADQ8N9N8 165 aaKnown RBP8.82□□□□□ -1
CRNKL1-205ENST00000496549 FAM207AQ9NSI2 230 aaPredicted RBP8.82□□□□□ -1
CRNKL1-205ENST00000496549 CABP1Q9NZU7 370 aa8.82□□□□□ -1
CRNKL1-205ENST00000496549 HBS1LQ9Y450 684 aaKnown RBP8.82□□□□□ -1
CRNKL1-205ENST00000496549 MROH7-TTC4A0A0A0MT08 1334 aa8.82□□□□□ -1
CRNKL1-205ENST00000496549 NCKAP5LQ9HCH0 1330 aa8.82□□□□□ -1
CRNKL1-205ENST00000496549 E7EWF7 191 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 GOLGA8TH3BQL2 631 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 GOLGA8HP0CJ92 632 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 CETN2P41208 172 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 PLTPP55058 493 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 PHEXP78562 749 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ARID5AQ03989 594 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ASPHQ12797 758 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 NDUFA5Q16718 116 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 PDCD4Q53EL6 469 aaKnown RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 CMPK2Q5EBM0 449 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 DNAJC14Q6Y2X3 702 aaPredicted RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 ANO5Q75V66 913 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 SAPCD2Q86UD0 394 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 DIS3L2Q8IYB7 885 aaKnown RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 ANKRD35Q8N283 1001 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 INPP5DQ92835 1189 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 TTC1Q99614 292 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 TUBGCP2Q9BSJ2 902 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 NT5C3AQ9H0P0 336 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 PA2G4Q9UQ80 394 aaKnown RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 LZTS1Q9Y250 596 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ZC3H4Q9UPT8 1303 aaKnown RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 FOXN1O15353 648 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 EIF2S1P05198 315 aaKnown RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 RARAP10276 462 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ALADP13716 330 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 TARSP26639 723 aaKnown RBP8.81□□□□□ -1
CRNKL1-205ENST00000496549 CCNFP41002 786 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 HERVK_113P62684 666 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 NOSTRINQ8IVI9 506 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 LRRC43Q8N309 656 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 TRIML2Q8N7C3 387 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ATP8B4Q8TF62 1192 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 SPIRE2Q8WWL2 714 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 MS4A14Q96JA4 679 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 C10orf88Q9H8K7 445 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 TMOD2Q9NZR1 351 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 SLC12A6Q9UHW9 1150 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 SERPINA10Q9UK55 444 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 SH3TC1Q8TE82 1336 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ASMTLO95671 621 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ASLP04424 464 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 BNIP1Q12981 228 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 DDB1Q16531 1140 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 MMEL1Q495T6 779 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 CAPN12Q6ZSI9 719 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 RSPH3Q86UC2 560 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 NAT14Q8WUY8 206 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 SKA1Q96BD8 255 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 SLITRK6Q9H5Y7 841 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 ARHGEF3Q9NR81 526 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 TBCCD1Q9NVR7 557 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 TFR2Q9UP52 801 aa8.81□□□□□ -1
CRNKL1-205ENST00000496549 DAPK3O43293 454 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 TPBGLP0DKB5 382 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 C1orf228Q6PIY5 440 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 ZNF589Q86UQ0 364 aaPredicted RBP8.8□□□□□ -1
CRNKL1-205ENST00000496549 ATXN2LQ8WWM7 1075 aaKnown RBP8.8□□□□□ -1
CRNKL1-205ENST00000496549 VPS50Q96JG6 964 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 FNBP1Q96RU3 617 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 ASCC2Q9H1I8 757 aaPredicted RBP8.8□□□□□ -1
CRNKL1-205ENST00000496549 ETNK2Q9NVF9 386 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 CLIC5Q9NZA1 410 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 PTTG2Q9NZH5 202 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 HAO1Q9UJM8 370 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 SYNPO2Q9UMS6 1093 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 CDK7P50613 346 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 TUBA1BP68363 451 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 HPCAP84074 193 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 KCTD21Q4G0X4 260 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 IZUMO2Q6UXV1 221 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.8□□□□□ -1
CRNKL1-205ENST00000496549 TUBA1AQ71U36 451 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 DGCR14Q96DF8 476 aaKnown RBP8.8□□□□□ -1
CRNKL1-205ENST00000496549 EPSTI1Q96J88 318 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 DSCC1Q9BVC3 393 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 METTL14Q9HCE5 456 aaKnown RBP8.8□□□□□ -1
CRNKL1-205ENST00000496549 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 ZNF212Q9UDV6 495 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 HPSEQ9Y251 543 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 FADS3Q9Y5Q0 445 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 SETD1BQ9UPS6 1966 aaKnown RBP8.8□□□□□ -1
CRNKL1-205ENST00000496549 A0A1W2PP64 1363 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 ARHGAP42A6NI28 874 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 PALMO75781 387 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 STAMBPO95630 424 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 UBA7P41226 1012 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 AMPD3Q01432 767 aa8.8□□□□□ -1
CRNKL1-205ENST00000496549 GRAMD1BQ3KR37 738 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms