RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 KRT79Q5XKE5 535 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 TPH2Q8IWU9 490 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 C4orf19Q8IY42 314 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 DYDC2Q96IM9 177 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 HSD17B14Q9BPX1 270 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 POLR3CQ9BUI4 534 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-235ENST00000495515 TUFT1Q9NNX1 390 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 SETD4Q9NVD3 440 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 RGL1Q9NZL6 768 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 COL1A2P08123 1366 aa19.17■□□□□ 0.66
HDAC6-235ENST00000495515 ZNF862O60290 1169 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 B4GALT4O60513 344 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 SLITRK3O94933 977 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 SLC34A2O95436 690 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 CD4P01730 458 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 CLTBP09497 229 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 INSRRP14616 1297 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 ATP4AP20648 1035 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 MUTP22033 750 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 LONP1P36776 959 aaKnown RBP19.16■□□□□ 0.66
HDAC6-235ENST00000495515 CYP4A11Q02928 519 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 DNM1Q05193 864 aaKnown RBP19.16■□□□□ 0.66
HDAC6-235ENST00000495515 CTTNQ14247 550 aaKnown RBP19.16■□□□□ 0.66
HDAC6-235ENST00000495515 UGCGQ16739 394 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 GDF6Q6KF10 455 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-235ENST00000495515 OTUD6AQ7L8S5 288 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 C7orf61Q8IZ16 206 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 LINC00301Q8NCQ3 95 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 KCNG4Q8TDN1 519 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 TRPV6Q9H1D0 765 aa19.16■□□□□ 0.66
HDAC6-235ENST00000495515 TRMT13Q9NUP7 481 aaKnown RBP19.16■□□□□ 0.66
HDAC6-235ENST00000495515 SRPRBQ9Y5M8 271 aaKnown RBP19.16■□□□□ 0.66
HDAC6-235ENST00000495515 BRCA2P51587 3418 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 DDX11L8A8MPP1 907 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 SPTLC2O15270 562 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 LYPLA2O95372 231 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 NCLP19338 710 aaKnown RBP19.15■□□□□ 0.66
HDAC6-235ENST00000495515 RPA1P27694 616 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 MARCKSP29966 332 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-235ENST00000495515 HOXC8P31273 242 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 CCT6AP40227 531 aaKnown RBP19.15■□□□□ 0.66
HDAC6-235ENST00000495515 IL17AQ16552 155 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 TRMT1LQ7Z2T5 733 aaKnown RBP19.15■□□□□ 0.66
HDAC6-235ENST00000495515 CCDC155Q8N6L0 562 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 KRI1Q8N9T8 703 aaKnown RBP19.15■□□□□ 0.66
HDAC6-235ENST00000495515 SNX29Q8TEQ0 813 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 PPP1R13LQ8WUF5 828 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 TMEM39AQ9NV64 488 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 CHMP5Q9NZZ3 219 aa19.15■□□□□ 0.66
HDAC6-235ENST00000495515 SEPT9Q9UHD8 586 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-235ENST00000495515 SLC26A4O43511 780 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 PPP6R2O75170 966 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 RPLP2P05387 115 aaKnown RBP19.14■□□□□ 0.65
HDAC6-235ENST00000495515 UBA7P41226 1012 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 IGBP1P78318 339 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 FAAP100Q0VG06 881 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 PTK7Q13308 1070 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 CATSPER3Q86XQ3 398 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 CCDC43Q96MW1 224 aaKnown RBP19.14■□□□□ 0.65
HDAC6-235ENST00000495515 NIFKQ9BYG3 293 aaKnown RBP19.14■□□□□ 0.65
HDAC6-235ENST00000495515 PRDM5Q9NQX1 630 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-235ENST00000495515 TUBE1Q9UJT0 475 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 PPME1Q9Y570 386 aa19.14■□□□□ 0.65
HDAC6-235ENST00000495515 MAGEB2O15479 319 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
HDAC6-235ENST00000495515 YWHABP31946 246 aaKnown RBP19.13■□□□□ 0.65
HDAC6-235ENST00000495515 TAF2Q6P1X5 1199 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 EXOC8Q8IYI6 725 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 KCTD17Q8N5Z5 321 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 CDK5RAP3Q96JB5 506 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 NACC1Q96RE7 527 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 SCAND2PQ9GZW5 306 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-235ENST00000495515 ANKEF1Q9NU02 776 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 FBXO2Q9UK22 296 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-235ENST00000495515 KDM3AQ9Y4C1 1321 aa19.13■□□□□ 0.65
HDAC6-235ENST00000495515 MBLAC1A4D2B0 266 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-235ENST00000495515 TREHO43280 583 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 MED24O75448 989 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 SPATA31C1P0DKV0 1188 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 TXLNAP40222 546 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 ADAM17P78536 824 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 BFSP2Q13515 415 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 RSPH3Q86UC2 560 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 SERINC5Q86VE9 423 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 CAGE1Q8TC20 777 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 CALML4Q96GE6 196 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 JPH2Q9BR39 696 aaPredicted RBP19.12■□□□□ 0.65
HDAC6-235ENST00000495515 NT5C3AQ9H0P0 336 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 PDLIM7Q9NR12 457 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 RCOR1Q9UKL0 485 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 TBX21Q9UL17 535 aa19.12■□□□□ 0.65
HDAC6-235ENST00000495515 MKI67P46013 3256 aaKnown RBP19.12■□□□□ 0.65
HDAC6-235ENST00000495515 PP2D1A8MPX8 630 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 KIAA0355O15063 1070 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 STBD1O95210 358 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 CYP2C9P11712 490 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 KLRC1P26715 233 aa19.11■□□□□ 0.65
HDAC6-235ENST00000495515 ZNF200P98182 395 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-235ENST00000495515 TBC1D8BQ0IIM8 1120 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms