RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 IER5LQ5T953 404 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 ZNF654Q8IZM8 581 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 FBXL6Q8N531 539 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 IGDCC4Q8TDY8 1250 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 SNX27Q96L92 541 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 PHOX2BQ99453 314 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 PSTPIP2Q9H939 334 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 JPH1Q9HDC5 661 aaPredicted RBP20.26■□□□□ 0.83
NUP50-218ENST00000493456 RNF216Q9NWF9 866 aaPredicted RBP20.26■□□□□ 0.83
NUP50-218ENST00000493456 PCDHA2Q9Y5H9 948 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 KDM3AQ9Y4C1 1321 aa20.26■□□□□ 0.83
NUP50-218ENST00000493456 IGHDP01880 384 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 GNAQP50148 359 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 SIGLEC14Q08ET2 396 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 RBM23Q86U06 439 aaKnown RBP20.25■□□□□ 0.83
NUP50-218ENST00000493456 NME8Q8N427 588 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 CDCA3Q99618 268 aaPredicted RBP20.25■□□□□ 0.83
NUP50-218ENST00000493456 CELF4Q9BZC1 486 aaKnown RBP20.25■□□□□ 0.83
NUP50-218ENST00000493456 TLE6Q9H808 572 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 JADE2Q9NQC1 790 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 AAASQ9NRG9 546 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 TRPC6Q9Y210 931 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 PCDHB12Q9Y5F1 795 aa20.25■□□□□ 0.83
NUP50-218ENST00000493456 SPDYE3A6NKU9 549 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 SARSP49591 514 aaKnown RBP20.24■□□□□ 0.83
NUP50-218ENST00000493456 ANTXR2P58335 489 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 TCF15Q12870 199 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 ZBTB10Q96DT7 871 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 PCYT2Q99447 389 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 LY9Q9HBG7 655 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 PKD2L1Q9P0L9 805 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 SLC9A2Q9UBY0 812 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 KMT2EQ8IZD2 1858 aa20.24■□□□□ 0.83
NUP50-218ENST00000493456 SMIM35A0A1B0GVV1 85 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 PTH1RQ03431 593 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 TMEM62Q0P6H9 643 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 PLPPR4Q7Z2D5 763 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 MB21D2Q8IYB1 491 aaPredicted RBP20.23■□□□□ 0.83
NUP50-218ENST00000493456 ATP8B4Q8TF62 1192 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 SUSD6Q92537 303 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 MTA3Q9BTC8 594 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 MYL10Q9BUA6 226 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 IRF2BPLQ9H1B7 796 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 PLXNA4Q9HCM2 1894 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 TLR9Q9NR96 1032 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 PCDHB7Q9Y5E2 793 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 ZDBF2Q9HCK1 2354 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 DMDP11532 3685 aa20.23■□□□□ 0.83
NUP50-218ENST00000493456 SRGAP2BP0DMP2 458 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 KRT76Q01546 638 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 PLCB4Q15147 1175 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 PDE12Q6L8Q7 609 aaKnown RBP20.22■□□□□ 0.83
NUP50-218ENST00000493456 MICAL1Q8TDZ2 1067 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 RPGRIP1Q96KN7 1286 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 NEK1Q96PY6 1258 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 TMX1Q9H3N1 280 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
NUP50-218ENST00000493456 PPFIA3O75145 1194 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 PLEKHA8P1O95397 391 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 GSPT1P15170 499 aaKnown RBP20.21■□□□□ 0.83
NUP50-218ENST00000493456 GATMP50440 423 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 UBE2SQ16763 222 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 DUSP6Q16828 381 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 ODR4Q5SWX8 454 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 SPOUT1Q5T280 376 aaKnown RBP20.21■□□□□ 0.83
NUP50-218ENST00000493456 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 CASC1Q6TDU7 716 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 SRBD1Q8N5C6 995 aaKnown RBP20.21■□□□□ 0.83
NUP50-218ENST00000493456 ASIC4Q96FT7 647 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 SDF4Q9BRK5 362 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 KCNH7Q9NS40 1196 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 C1orf112Q9NSG2 853 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 PCDHA6Q9UN73 950 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 PCDHGC5Q9Y5F6 944 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 PCDHA8Q9Y5H6 950 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 NFASCO94856 1347 aa20.21■□□□□ 0.83
NUP50-218ENST00000493456 SLC26A2P50443 739 aa20.2■□□□□ 0.82
NUP50-218ENST00000493456 STAT5BP51692 787 aa20.2■□□□□ 0.82
NUP50-218ENST00000493456 ACTR2P61160 394 aa20.2■□□□□ 0.82
NUP50-218ENST00000493456 NFX1Q12986 1120 aaKnown RBP20.2■□□□□ 0.82
NUP50-218ENST00000493456 MTHFD1LQ6UB35 978 aa20.2■□□□□ 0.82
NUP50-218ENST00000493456 TMTC2Q8N394 836 aa20.2■□□□□ 0.82
NUP50-218ENST00000493456 TRAPPC12Q8WVT3 735 aa20.2■□□□□ 0.82
NUP50-218ENST00000493456 VPS13AQ96RL7 3174 aa20.2■□□□□ 0.82
NUP50-218ENST00000493456 DENND3A2RUS2 1198 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 TBKBP1A7MCY6 615 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 PER2O15055 1255 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 FGF18O76093 207 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 CALM1P0DP23 149 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 CALM2P0DP24 149 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 CALM3P0DP25 149 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 CHMLP26374 656 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 PTPN21Q16825 1174 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 TMEM266Q2M3C6 531 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 TEX2Q8IWB9 1127 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 VN1R2Q8NFZ6 395 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 MXRA8Q9BRK3 442 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 ERVK-5Q9HDB9 667 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 RGS18Q9NS28 235 aa20.19■□□□□ 0.82
NUP50-218ENST00000493456 LOXHD1Q8IVV2 1947 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms