RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 USP15Q9Y4E8 981 aaPredicted RBP12.62□□□□□ -0.39
SND1-215ENST00000492772 UBIAD1Q9Y5Z9 338 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 KDM3AQ9Y4C1 1321 aa12.62□□□□□ -0.39
SND1-215ENST00000492772 FNDC1Q4ZHG4 1894 aaPredicted RBP12.61□□□□□ -0.39
SND1-215ENST00000492772 GLP2RO95838 553 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 IGHDP01880 384 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 ANTXR2P58335 489 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 RTN4RL1Q86UN2 441 aaPredicted RBP12.61□□□□□ -0.39
SND1-215ENST00000492772 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
SND1-215ENST00000492772 FBXL6Q8N531 539 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 IGDCC4Q8TDY8 1250 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 MTA3Q9BTC8 594 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
SND1-215ENST00000492772 JADE2Q9NQC1 790 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 AAASQ9NRG9 546 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 SLC9A2Q9UBY0 812 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 BARX2Q9UMQ3 279 aaPredicted RBP12.61□□□□□ -0.39
SND1-215ENST00000492772 PCDHB12Q9Y5F1 795 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
SND1-215ENST00000492772 SMIM35A0A1B0GVV1 85 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
SND1-215ENST00000492772 ATF7P17544 494 aaPredicted RBP12.6□□□□□ -0.39
SND1-215ENST00000492772 SARSP49591 514 aaKnown RBP12.6□□□□□ -0.39
SND1-215ENST00000492772 PTH1RQ03431 593 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 SIGLEC14Q08ET2 396 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 TMEM62Q0P6H9 643 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 CASC1Q6TDU7 716 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 RBM23Q86U06 439 aaKnown RBP12.6□□□□□ -0.39
SND1-215ENST00000492772 NME8Q8N427 588 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 PCYT2Q99447 389 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 CDCA3Q99618 268 aaPredicted RBP12.6□□□□□ -0.39
SND1-215ENST00000492772 MYL10Q9BUA6 226 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 CELF4Q9BZC1 486 aaKnown RBP12.6□□□□□ -0.39
SND1-215ENST00000492772 TLE6Q9H808 572 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 LY9Q9HBG7 655 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 TLR9Q9NR96 1032 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 TAF6LQ9Y6J9 622 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 NFASCO94856 1347 aa12.6□□□□□ -0.39
SND1-215ENST00000492772 ST18O60284 1047 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 PLEKHA8P1O95397 391 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 CALM1P0DP23 149 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 CALM2P0DP24 149 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 CALM3P0DP25 149 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 GATMP50440 423 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 SLC26A2P50443 739 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 KRT76Q01546 638 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 UBE2SQ16763 222 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 ODR4Q5SWX8 454 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 SPOUT1Q5T280 376 aaKnown RBP12.59□□□□□ -0.39
SND1-215ENST00000492772 PDE12Q6L8Q7 609 aaKnown RBP12.59□□□□□ -0.39
SND1-215ENST00000492772 PLPPR4Q7Z2D5 763 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 TEX2Q8IWB9 1127 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 ZBTB10Q96DT7 871 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 C1orf112Q9NSG2 853 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 PCDHB7Q9Y5E2 793 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 USP34Q70CQ2 3546 aa12.59□□□□□ -0.39
SND1-215ENST00000492772 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 CHMLP26374 656 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 STAT5BP51692 787 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 ACTR2P61160 394 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 IER5LQ5T953 404 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 MTHFD1LQ6UB35 978 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 NFXL1Q6ZNB6 911 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 TMTC2Q8N394 836 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 SRBD1Q8N5C6 995 aaKnown RBP12.58□□□□□ -0.4
SND1-215ENST00000492772 MICAL1Q8TDZ2 1067 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 ATP8B4Q8TF62 1192 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 TRAPPC12Q8WVT3 735 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 SUSD6Q92537 303 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 RPGRIP1Q96KN7 1286 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 SNX27Q96L92 541 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 IRF2BPLQ9H1B7 796 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 TMX1Q9H3N1 280 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 KCNH7Q9NS40 1196 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 PCDHA6Q9UN73 950 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 PCDHA8Q9Y5H6 950 aa12.58□□□□□ -0.4
SND1-215ENST00000492772 COL1A2P08123 1366 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 ZDBF2Q9HCK1 2354 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 DENND3A2RUS2 1198 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 SH2B2O14492 632 aaPredicted RBP12.57□□□□□ -0.4
SND1-215ENST00000492772 SGSM2O43147 1006 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 PRC1O43663 620 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 FGF18O76093 207 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 TCF15Q12870 199 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 NFX1Q12986 1120 aaKnown RBP12.57□□□□□ -0.4
SND1-215ENST00000492772 PTPN21Q16825 1174 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 DUSP6Q16828 381 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 TMEM266Q2M3C6 531 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 THNSL1Q8IYQ7 743 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
SND1-215ENST00000492772 MXRA8Q9BRK3 442 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms