RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 GNAT1P11488 350 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 PPIGQ13427 754 aaKnown RBP eCLIP17.11■□□□□ 0.336e-8■□□□□ 9
SS18L1-204ENST00000491916 CALCRLQ16602 461 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 TTC38Q5R3I4 469 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 RPAINQ86UA6 219 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.332e-21■■■■■ 30.7
SS18L1-204ENST00000491916 IL23AQ9NPF7 189 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 SAMM50Q9Y512 469 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 PCDHB6Q9Y5E3 794 aa17.11■□□□□ 0.33
SS18L1-204ENST00000491916 RRN3P2A6NIE6 340 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 NBNO60934 754 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 SELPP16109 830 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 SYT1P21579 422 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 IGBP1P78318 339 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
SS18L1-204ENST00000491916 TARBP2Q15633 366 aaKnown RBP17.1■□□□□ 0.33
SS18L1-204ENST00000491916 TCTN1Q2MV58 587 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
SS18L1-204ENST00000491916 TUBE1Q9UJT0 475 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 TRPC6Q9Y210 931 aa17.1■□□□□ 0.33
SS18L1-204ENST00000491916 EVPLQ92817 2033 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 CHD9Q3L8U1 2897 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 H3BQV1 296 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 CXCL10P02778 98 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 PRKCEQ02156 737 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 MGAT3Q09327 533 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 EPHA7Q15375 998 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 FAM26DQ5JW98 314 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 MTHFD1LQ6UB35 978 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 ZNF365Q70YC5 407 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 LRRC8DQ7L1W4 858 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
SS18L1-204ENST00000491916 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.09■□□□□ 0.33
SS18L1-204ENST00000491916 RGL1Q9NZL6 768 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 PCDHA2Q9Y5H9 948 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 SIP14410 1827 aa17.09■□□□□ 0.33
SS18L1-204ENST00000491916 COL1A2P08123 1366 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 TMEM150BA6NC51 233 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
SS18L1-204ENST00000491916 BAG4O95429 457 aaKnown RBP17.08■□□□□ 0.32
SS18L1-204ENST00000491916 C22orf31O95567 290 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 CHRNA1P02708 482 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 OATP04181 439 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 KLRC1P26715 233 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 THPOP40225 353 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 TXKP42681 527 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 GNL2Q13823 731 aaKnown RBP17.08■□□□□ 0.32
SS18L1-204ENST00000491916 IL17AQ16552 155 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 LINC01465Q8N7H1 131 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 BANK1Q8NDB2 785 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 HSD17B14Q9BPX1 270 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 NIFKQ9BYG3 293 aaKnown RBP17.08■□□□□ 0.32
SS18L1-204ENST00000491916 MTMR6Q9Y217 621 aa17.08■□□□□ 0.32
SS18L1-204ENST00000491916 CAND2O75155 1236 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 SLITRK3O94933 977 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 P4HBP07237 508 aaKnown RBP17.07■□□□□ 0.32
SS18L1-204ENST00000491916 OR52Z1P0C646 297 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 RFC2P35250 354 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 PSMC5P62195 406 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 LRIT3Q3SXY7 679 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 TAF2Q6P1X5 1199 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 ANO5Q75V66 913 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 TRMT1LQ7Z2T5 733 aaKnown RBP17.07■□□□□ 0.32
SS18L1-204ENST00000491916 DEFB128Q7Z7B8 93 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 KIAA0319LQ8IZA0 1049 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 DNAJB3Q8WWF6 145 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 HERVK_113Q902F9 699 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 DYDC2Q96IM9 177 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 FAM167AQ96KS9 214 aa17.07■□□□□ 0.32
SS18L1-204ENST00000491916 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
SS18L1-204ENST00000491916 NOL7Q9UMY1 257 aaKnown RBP17.07■□□□□ 0.32
SS18L1-204ENST00000491916 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 SMIM35A0A1B0GVV1 85 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 POTEMA6NI47 508 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 ZBTB39O15060 712 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 SPATA31C1P0DKV0 1188 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 QARSP47897 775 aaKnown RBP17.06■□□□□ 0.32
SS18L1-204ENST00000491916 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
SS18L1-204ENST00000491916 RESTQ13127 1097 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 PTGDRQ13258 359 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 XKR3Q5GH77 459 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
SS18L1-204ENST00000491916 TNPO1Q92973 898 aaKnown RBP17.06■□□□□ 0.32
SS18L1-204ENST00000491916 EIF2AK1Q9BQI3 630 aaKnown RBP17.06■□□□□ 0.32
SS18L1-204ENST00000491916 CDH23Q9H251 3354 aa17.06■□□□□ 0.32
SS18L1-204ENST00000491916 MARCH6O60337 910 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms