RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CYP2C9P11712 490 aa10.56□□□□□ -0.72
BRCA1-219ENST00000491747 XBP1P17861 261 aa10.56□□□□□ -0.72
BRCA1-219ENST00000491747 TCF7P36402 384 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-219ENST00000491747 ZNF200P98182 395 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-219ENST00000491747 NONOQ15233 471 aaKnown RBP eCLIP10.56□□□□□ -0.72
BRCA1-219ENST00000491747 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
BRCA1-219ENST00000491747 SLC9A2Q9UBY0 812 aa10.56□□□□□ -0.72
BRCA1-219ENST00000491747 PRKAG2Q9UGJ0 569 aa10.56□□□□□ -0.72
BRCA1-219ENST00000491747 RANBP2P49792 3224 aaKnown RBP10.56□□□□□ -0.72
BRCA1-219ENST00000491747 BTBD18B2RXH4 712 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 H3BRB1 525 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 TLR3O15455 904 aaKnown RBP10.55□□□□□ -0.72
BRCA1-219ENST00000491747 TIMP1P01033 207 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 U2AF2P26368 475 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■■□□ 19.1
BRCA1-219ENST00000491747 NCBP1Q09161 790 aaKnown RBP10.55□□□□□ -0.72
BRCA1-219ENST00000491747 TPD52L1Q16890 204 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-219ENST00000491747 SARM1Q6SZW1 724 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 PIK3AP1Q6ZUJ8 805 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 KRT25Q7Z3Z0 450 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 SESTD1Q86VW0 696 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 SEPT1Q8WYJ6 367 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 ZNF577Q9BSK1 485 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 SEZ6LQ9BYH1 1024 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 PPP1R12CQ9BZL4 782 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 RNPEPQ9H4A4 650 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
BRCA1-219ENST00000491747 JPH1Q9HDC5 661 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-219ENST00000491747 CYP3A7-CYP3A51PA0A087WV96 503 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
BRCA1-219ENST00000491747 MSH4O15457 936 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 RAG1P15918 1043 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 CYP3A7P24462 503 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 CYP2C18P33260 490 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 BMP8BP34820 402 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 KRT2P35908 639 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 EPHB4P54760 987 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 ACTR2P61160 394 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 PTPN11Q06124 597 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-219ENST00000491747 RESTQ13127 1097 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 MBOAT7Q96N66 472 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 SDF4Q9BRK5 362 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 GTF2IRD1Q9UHL9 959 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 TANC1Q9C0D5 1861 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 KAT6AQ92794 2004 aa10.55□□□□□ -0.72
BRCA1-219ENST00000491747 WNT7AO00755 349 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 SLC37A4O43826 429 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 ATG7O95352 703 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 Q4G0T1 1027 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 DIS3L2Q8IYB7 885 aaKnown RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 C7orf31Q8N865 590 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 DHX38Q92620 1227 aaKnown RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 MRFAP1L1Q96HT8 127 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 NOC4LQ9BVI4 516 aaKnown RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 KATNAL1Q9BW62 490 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 OGFRQ9NZT2 677 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 CGNQ9P2M7 1197 aaKnown RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 MYH9P35579 1960 aaKnown RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 CCDC194A0A1B0GVG4 234 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 LGR5O75473 907 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 SETQ01105 290 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 STX1AQ16623 288 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 PTGISQ16647 500 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 LETM2Q2VYF4 491 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 WNT8BQ93098 351 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 LBHD1Q9BQE6 289 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 UBE2OQ9C0C9 1292 aaKnown RBP10.54□□□□□ -0.72
BRCA1-219ENST00000491747 WNT8AQ9H1J5 351 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 HIPK3Q9H422 1215 aa10.54□□□□□ -0.72
BRCA1-219ENST00000491747 BECN2A8MW95 431 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 MARK3P27448 753 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 HOXC8P31273 242 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 CCL23P55773 120 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 HABP4Q5JVS0 413 aaKnown RBP10.53□□□□□ -0.72
BRCA1-219ENST00000491747 MFSD5Q6N075 450 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 ABHD15Q6UXT9 468 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 NEK8Q86SG6 692 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 LRRC8AQ8IWT6 810 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 SLC5A5Q92911 643 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 VWCEQ96DN2 955 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 EMSYQ7Z589 1322 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 IGKV6D-21A0A0A0MT36 114 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 SUPT20HL2P0C7V6 817 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 CSF2RAP15509 400 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 TRIM29Q14134 588 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 IQCB1Q15051 598 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 C9orf50Q5SZB4 431 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 CEP135Q66GS9 1140 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 ATL3Q6DD88 541 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 MOXD1Q6UVY6 613 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 CCDC73Q6ZRK6 1079 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 C16orf59Q7L2K0 433 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 FBXO18Q8NFZ0 1043 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 ETNPPLQ8TBG4 499 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 SCLYQ96I15 445 aa10.53□□□□□ -0.72
BRCA1-219ENST00000491747 TBC1D22BQ9NU19 505 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms