RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 SPATA20Q8TB22 786 aa10.79□□□□□ -0.68
NOD1-208ENST00000489614 CUL5Q93034 780 aa10.79□□□□□ -0.68
NOD1-208ENST00000489614 YIPF2Q9BWQ6 316 aa10.79□□□□□ -0.68
NOD1-208ENST00000489614 HAUS2Q9NVX0 235 aa10.79□□□□□ -0.68
NOD1-208ENST00000489614 FDX1P10109 184 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 HOXA7P31268 230 aaPredicted RBP10.78□□□□□ -0.68
NOD1-208ENST00000489614 SREBF1P36956 1147 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 ADKP55263 362 aaKnown RBP10.78□□□□□ -0.68
NOD1-208ENST00000489614 UBASH3AP57075 661 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 PPFIA1Q13136 1202 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 NONOQ15233 471 aaKnown RBP eCLIP10.78□□□□□ -0.68
NOD1-208ENST00000489614 NT5DC1Q5TFE4 455 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 CCDC73Q6ZRK6 1079 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 FBXO11Q86XK2 927 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 SPICE1Q8N0Z3 855 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 SLF1Q9BQI6 1058 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 FBXO28Q9NVF7 368 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 HPCAL4Q9UM19 191 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 ACTN4O43707 911 aaKnown RBP10.78□□□□□ -0.68
NOD1-208ENST00000489614 PPATQ06203 517 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 PTGDRQ13258 359 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 SPATA21Q7Z572 469 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 NCAPG2Q86XI2 1143 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 OR8K1Q8NGG5 319 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 KCNMB3Q9NPA1 279 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 BAIAP2L1Q9UHR4 511 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 BLOC1S6Q9UL45 172 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 PCDHA1Q9Y5I3 950 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 GRIN2DO15399 1336 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 CTAGE15A4D2H0 777 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 POTEIP0CG38 1075 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 POTEJP0CG39 1038 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 CTAGE8P0CG41 777 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 DSG3P32926 999 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 GJA5P36382 358 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 MAGEA10P43363 369 aaPredicted RBP10.78□□□□□ -0.68
NOD1-208ENST00000489614 SLC8A3P57103 927 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 MTF1Q14872 753 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 INF2Q27J81 1249 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 Q4G0T1 1027 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 ZNF569Q5MCW4 686 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 FKBP15Q5T1M5 1219 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 BZW1Q7L1Q6 419 aaKnown RBP10.78□□□□□ -0.68
NOD1-208ENST00000489614 KRT26Q7Z3Y9 468 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 NEK8Q86SG6 692 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 CTAGE6Q86UF2 777 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 CTAGE4Q8IX94 777 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 LRRC15Q8TF66 581 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 STAMBPL1Q96FJ0 436 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 WNK4Q96J92 1243 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 CSRNP2Q9H175 543 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 MAP3K20Q9NYL2 800 aaKnown RBP10.78□□□□□ -0.68
NOD1-208ENST00000489614 TUBE1Q9UJT0 475 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 CDC23Q9UJX2 597 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
NOD1-208ENST00000489614 BUB1BO60566 1050 aaPredicted RBP10.77□□□□□ -0.68
NOD1-208ENST00000489614 TAL1P17542 331 aaPredicted RBP10.77□□□□□ -0.68
NOD1-208ENST00000489614 MARCKSP29966 332 aaPredicted RBP10.77□□□□□ -0.68
NOD1-208ENST00000489614 FXR2P51116 673 aaKnown RBP eCLIP10.77□□□□□ -0.68
NOD1-208ENST00000489614 USP11P51784 963 aa10.77□□□□□ -0.68
NOD1-208ENST00000489614 SNAP25P60880 206 aa10.77□□□□□ -0.68
NOD1-208ENST00000489614 FSIP1Q8NA03 581 aa10.77□□□□□ -0.68
NOD1-208ENST00000489614 TBCKQ8TEA7 893 aa10.77□□□□□ -0.68
NOD1-208ENST00000489614 MRPL44Q9H9J2 332 aaKnown RBP10.77□□□□□ -0.68
NOD1-208ENST00000489614 ZNF214Q9UL59 606 aaPredicted RBP10.77□□□□□ -0.68
NOD1-208ENST00000489614 IGLV3-22A0A075B6J6 115 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 SPDYE3A6NKU9 549 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 MAFGO15525 162 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 ARHGAP6O43182 974 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 PPIL2Q13356 520 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 UBE2SQ16763 222 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 FUKQ8N0W3 1084 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 PROCA1Q8NCQ7 364 aaPredicted RBP10.77□□□□□ -0.69
NOD1-208ENST00000489614 HAS1Q92839 578 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 RPAP3Q9H6T3 665 aaPredicted RBP10.77□□□□□ -0.69
NOD1-208ENST00000489614 PSTPIP2Q9H939 334 aa10.77□□□□□ -0.69
NOD1-208ENST00000489614 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.77□□□□□ -0.69
NOD1-208ENST00000489614 A0A1B0GVL5 298 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 VWA5AO00534 786 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 SLC37A4O43826 429 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 LONP1P36776 959 aaKnown RBP10.76□□□□□ -0.69
NOD1-208ENST00000489614 ME1P48163 572 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 SARSP49591 514 aaKnown RBP10.76□□□□□ -0.69
NOD1-208ENST00000489614 ZNF174Q15697 407 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 GPAT2Q6NUI2 795 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 MIS18BP1Q6P0N0 1132 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 USP49Q70CQ1 688 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 MSL3Q8N5Y2 521 aaKnown RBP10.76□□□□□ -0.69
NOD1-208ENST00000489614 ETNPPLQ8TBG4 499 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 RBM46Q8TBY0 533 aaKnown RBP10.76□□□□□ -0.69
NOD1-208ENST00000489614 SPAG5Q96R06 1193 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 CNMDO75829 334 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 PAX3P23760 479 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 AARSP49588 968 aaKnown RBP eCLIP10.76□□□□□ -0.69
NOD1-208ENST00000489614 PAPOLAP51003 745 aaKnown RBP10.76□□□□□ -0.69
NOD1-208ENST00000489614 SPIRE1Q08AE8 756 aa10.76□□□□□ -0.69
NOD1-208ENST00000489614 SPP2Q13103 211 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms