RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 TPH2Q8IWU9 490 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 TCEAL8Q8IYN2 117 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 CPA6Q8N4T0 437 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 C7orf31Q8N865 590 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 ARRDC4Q8NCT1 418 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 ZNF496Q96IT1 587 aaPredicted RBP6.18□□□□□ -1.42
SRRM1-215ENST00000488317 C16orf92Q96LL3 132 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 PCGF6Q9BYE7 350 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 ANO3Q9BYT9 981 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 PCMTD2Q9NV79 361 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 DNAJC28Q9NX36 388 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 USP36Q9P275 1121 aaKnown RBP6.18□□□□□ -1.42
SRRM1-215ENST00000488317 CTNND2Q9UQB3 1225 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 INVSQ9Y283 1065 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 GIT1Q9Y2X7 761 aa6.18□□□□□ -1.42
SRRM1-215ENST00000488317 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 KIAA1324LA8MWY0 1029 aaPredicted RBP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 ACOT7O00154 380 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 CAND2O75155 1236 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 APOL3O95236 402 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 IL33O95760 270 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 KRT18P05783 430 aaKnown RBP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 RNASE1P07998 156 aaKnown RBP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 U2AF1L5P0DN76 240 aaPredicted RBP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 U2AF1Q01081 240 aaKnown RBP eCLIP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 ODF1Q14990 250 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 NR1I3Q14994 352 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 GFOD2Q3B7J2 385 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 NXNQ6DKJ4 435 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 NFXL1Q6ZNB6 911 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 PHYKPLQ8IUZ5 450 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 MAGEB6Q8N7X4 407 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 ASB15Q8WXK1 588 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 E2F7Q96AV8 911 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 TUBGCP5Q96RT8 1024 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 RC3H2Q9HBD1 1191 aaKnown RBP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 TNFRSF12AQ9NP84 129 aa6.17□□□□□ -1.42
SRRM1-215ENST00000488317 CCM2LQ9NUG4 571 aaPredicted RBP6.17□□□□□ -1.42
SRRM1-215ENST00000488317 UBA6A0AVT1 1052 aaPredicted RBP6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PRAMEF22A3QJZ6 481 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 TRIM75PA6NK02 468 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 RASSF10A6NK89 507 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PRPF3O43395 683 aaKnown RBP6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PCDHGA12O60330 932 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 CLEC2LP0C7M8 214 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 FAHP16930 419 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 GNALP38405 381 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 AFMP43652 599 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 HERVK_113P62684 666 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PRR5P85299 388 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 SLC9A5Q14940 896 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 UGT8Q16880 541 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 ZNF792Q3KQV3 632 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 CT83Q5H943 113 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 ADGRF1Q5T601 910 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PRAMEF18Q5VWM3 479 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 CXorf57Q6NSI4 855 aaKnown RBP6.16□□□□□ -1.42
SRRM1-215ENST00000488317 SLC4A10Q6U841 1118 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 CXorf67Q86X51 503 aaPredicted RBP6.16□□□□□ -1.42
SRRM1-215ENST00000488317 FERMT2Q96AC1 680 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 HSPBAP1Q96EW2 488 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 RNF32Q9H0A6 362 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 QRSL1Q9H0R6 528 aaKnown RBP6.16□□□□□ -1.42
SRRM1-215ENST00000488317 POFUT1Q9H488 388 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 TCF7L1Q9HCS4 588 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 ARHGAP28Q9P2N2 729 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PNMA8BQ9ULN7 279 aaPredicted RBP6.16□□□□□ -1.42
SRRM1-215ENST00000488317 EDARQ9UNE0 448 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PCDHGA9Q9Y5G4 932 aaKnown RBP6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PCDHGA8Q9Y5G5 932 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PCDHGA7Q9Y5G6 932 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PCDHGA6Q9Y5G7 932 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PCDHGA3Q9Y5H0 932 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 PCDHGA2Q9Y5H1 932 aa6.16□□□□□ -1.42
SRRM1-215ENST00000488317 VCAM1P19320 739 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 ENPP1P22413 925 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 CYP2C19P33261 490 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 PDE6BP35913 854 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 ERVFRD-1P60508 538 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 KRT85P78386 507 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 FSCN1Q16658 493 aaKnown RBP6.15□□□□□ -1.42
SRRM1-215ENST00000488317 TOR2AQ5JU69 321 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 TTC38Q5R3I4 469 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 TMEM240Q5SV17 173 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 PRAMEF9Q5VWM5 478 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 CCDC62Q6P9F0 684 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 TTLL11Q8NHH1 800 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 EAF2Q96CJ1 260 aaPredicted RBP6.15□□□□□ -1.42
SRRM1-215ENST00000488317 DDX11Q96FC9 970 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 LRGUKQ96M69 825 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 CHMP4AQ9BY43 222 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 SEMA4AQ9H3S1 761 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 BCAS3Q9H6U6 928 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 YBX2Q9Y2T7 364 aaKnown RBP6.15□□□□□ -1.42
SRRM1-215ENST00000488317 ASB1Q9Y576 335 aa6.15□□□□□ -1.42
SRRM1-215ENST00000488317 ST20-MTHFSA0A0A6YYL1 179 aa6.14□□□□□ -1.43
SRRM1-215ENST00000488317 PLIN1O60240 522 aa6.14□□□□□ -1.43
SRRM1-215ENST00000488317 PEX14O75381 377 aa6.14□□□□□ -1.43
SRRM1-215ENST00000488317 SRSF2Q01130 221 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms