RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PLEKHA8P1O95397 391 aa17.64■□□□□ 0.41
MCF2L-228ENST00000487354 SCG2P13521 617 aa17.64■□□□□ 0.41
MCF2L-228ENST00000487354 KCNC3Q14003 757 aa17.64■□□□□ 0.41
MCF2L-228ENST00000487354 GLG1Q92896 1179 aa17.64■□□□□ 0.41
MCF2L-228ENST00000487354 PHF7Q9BWX1 381 aaPredicted RBP17.64■□□□□ 0.41
MCF2L-228ENST00000487354 LY9Q9HBG7 655 aa17.64■□□□□ 0.41
MCF2L-228ENST00000487354 FAM86C1Q9NVL1 165 aa17.64■□□□□ 0.41
MCF2L-228ENST00000487354 KDM3AQ9Y4C1 1321 aa17.64■□□□□ 0.41
MCF2L-228ENST00000487354 SPTBN4Q9H254 2564 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 FSCN2O14926 492 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 PER2O15055 1255 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 SIGLEC14Q08ET2 396 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 TRDNQ13061 729 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 MTMR1Q13613 665 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 PLCB4Q15147 1175 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 UBE2SQ16763 222 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 CATIPQ7Z7H3 387 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 SRBD1Q8N5C6 995 aaKnown RBP17.63■□□□□ 0.41
MCF2L-228ENST00000487354 CUL5Q93034 780 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 PPP2R3CQ969Q6 453 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 CDHR1Q96JP9 859 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 MAP3K14Q99558 947 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 JADE2Q9NQC1 790 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 PCDHA2Q9Y5H9 948 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 MYO10Q9HD67 2058 aa17.63■□□□□ 0.41
MCF2L-228ENST00000487354 DCHS1Q96JQ0 3298 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 RRN3P2A6NIE6 340 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 ATF7P17544 494 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-228ENST00000487354 PDE4AP27815 886 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 SMARCA1P28370 1054 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 ERVFC1P60507 584 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 PAK2Q13177 524 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 PKN1Q16512 942 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 DUSP6Q16828 381 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 IER5Q5VY09 327 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 NCOA7Q8NI08 942 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 TMEM40Q8WWA1 233 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 RRP36Q96EU6 259 aaKnown RBP17.62■□□□□ 0.41
MCF2L-228ENST00000487354 RPGRIP1Q96KN7 1286 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 CELF4Q9BZC1 486 aaKnown RBP17.62■□□□□ 0.41
MCF2L-228ENST00000487354 S1PR5Q9H228 398 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-228ENST00000487354 ERVK-5Q9HDB9 667 aa17.62■□□□□ 0.41
MCF2L-228ENST00000487354 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-228ENST00000487354 ERICH2A1L162 156 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 ST18O60284 1047 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 DDAH1O94760 285 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 RPLP2P05387 115 aaKnown RBP17.61■□□□□ 0.41
MCF2L-228ENST00000487354 STAG3L1P0CL83 205 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 SARSP49591 514 aaKnown RBP17.61■□□□□ 0.41
MCF2L-228ENST00000487354 SUGP1Q8IWZ8 645 aaKnown RBP17.61■□□□□ 0.41
MCF2L-228ENST00000487354 CMTR1Q8N1G2 835 aaKnown RBP17.61■□□□□ 0.41
MCF2L-228ENST00000487354 CYP2W1Q8TAV3 490 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 PRRX2Q99811 253 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 TLE6Q9H808 572 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 CDHR5Q9HBB8 845 aa17.61■□□□□ 0.41
MCF2L-228ENST00000487354 JPH1Q9HDC5 661 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-228ENST00000487354 SMIM35A0A1B0GVV1 85 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 PPFIA3O75145 1194 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 PDGFBP01127 241 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-228ENST00000487354 UBE3AQ05086 875 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 ITGB3BPQ13352 177 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-228ENST00000487354 PTPN21Q16825 1174 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 FAM102BQ5T8I3 360 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 TTC22Q5TAA0 569 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 MTHFD1LQ6UB35 978 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 RALYLQ86SE5 291 aaKnown RBP17.6■□□□□ 0.41
MCF2L-228ENST00000487354 CWH43Q9H720 699 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 PSTPIP2Q9H939 334 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 TLR9Q9NR96 1032 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 SLC9A2Q9UBY0 812 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 DENND4AQ7Z401 1863 aa17.6■□□□□ 0.41
MCF2L-228ENST00000487354 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
MCF2L-228ENST00000487354 hCG_1642624A0A1W2PR95 340 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 C9IYK1 514 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 FGF18O76093 207 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 CHMLP26374 656 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 ACTR2P61160 394 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 AAMPQ13685 434 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 SART3Q15020 963 aaKnown RBP17.59■□□□□ 0.41
MCF2L-228ENST00000487354 SYCE2Q6PIF2 218 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 TMEM184AQ6ZMB5 413 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 COLGALT1Q8NBJ5 622 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 CTCFLQ8NI51 663 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-228ENST00000487354 KCNH7Q9NS40 1196 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 CDH22Q9UJ99 828 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 PCDHA6Q9UN73 950 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 NOC2LQ9Y3T9 749 aaKnown RBP17.59■□□□□ 0.41
MCF2L-228ENST00000487354 PCDHA8Q9Y5H6 950 aa17.59■□□□□ 0.41
MCF2L-228ENST00000487354 NFASCO94856 1347 aa17.58■□□□□ 0.4
MCF2L-228ENST00000487354 IGKV6D-21A0A0A0MT36 114 aa17.58■□□□□ 0.4
MCF2L-228ENST00000487354 ZBTB42B2RXF5 422 aa17.58■□□□□ 0.4
MCF2L-228ENST00000487354 GFRA3O60609 400 aa17.58■□□□□ 0.4
MCF2L-228ENST00000487354 RXRAP19793 462 aa17.58■□□□□ 0.4
MCF2L-228ENST00000487354 AVPR2P30518 371 aa17.58■□□□□ 0.4
MCF2L-228ENST00000487354 KRT76Q01546 638 aa17.58■□□□□ 0.4
MCF2L-228ENST00000487354 PLPPR4Q7Z2D5 763 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms