RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 SMG1Q96Q15 3661 aaKnown RBP7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 KIAA1217Q5T5P2 1943 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 GCN1Q92616 2671 aaKnown RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 GCOM1H8Y6P7 765 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 PLEKHA8P1O95397 391 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 AMHP03971 560 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 NR3C2P08235 984 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 HMGB1P09429 215 aaKnown RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 POLR2MP0CAP2 368 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 NPR3P17342 541 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 RXRAP19793 462 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 HOXA13P31271 388 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 NRIP1P48552 1158 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 ATXN1P54253 815 aaKnown RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 EXOSC10Q01780 885 aaKnown RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 ADCK5Q3MIX3 580 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 BRDTQ58F21 947 aaPredicted RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 ERICH6BQ5W0A0 696 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 CCDC62Q6P9F0 684 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 APOA5Q6Q788 366 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 SYNE3Q6ZMZ3 975 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 SEPT14Q6ZU15 432 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 DHX32Q7L7V1 743 aaKnown RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 SESTD1Q86VW0 696 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 SRBD1Q8N5C6 995 aaKnown RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 EFHBQ8N7U6 833 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 FEZF2Q8TBJ5 459 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 AFG1LQ8WV93 481 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 PIBF1Q8WXW3 757 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 PDCD2LQ9BRP1 358 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 APOL5Q9BWW9 433 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 S1PR5Q9H228 398 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 PPP4R2Q9NY27 417 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 GTF2IRD1Q9UHL9 959 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 R4GN57 208 aa7.4□□□□□ -1.22
CTDSPL-208ENST00000486978 ZFYVE26Q68DK2 2539 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 GPR179Q6PRD1 2367 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 BAZ2BQ9UIF8 2168 aaKnown RBP7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 PER2O15055 1255 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 KPNA6O60684 536 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 EFCAB14O75071 495 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 EIF3JO75822 258 aaKnown RBP7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 REC8O95072 547 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 GH1P01241 217 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 MMP1P03956 469 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 ITGB1P05556 798 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 ASGR2P07307 311 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 MYCLP12524 364 aaPredicted RBP7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 CCND2P30279 289 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 PGM5Q15124 567 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 ANGPT1Q15389 498 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 LY6KQ17RY6 165 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 MCTP2Q6DN12 878 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 TMTC3Q6ZXV5 915 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 FCHSD1Q86WN1 690 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 MICU3Q86XE3 530 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 RAB11FIP4Q86YS3 637 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 CCDC155Q8N6L0 562 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 FANCBQ8NB91 859 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 SPPL3Q8TCT6 385 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 KCNB2Q92953 911 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 CUL5Q93034 780 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 TCEANC2Q96MN5 208 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 ALG1Q9BT22 464 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 LMAN2LQ9H0V9 348 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 PLAGL2Q9UPG8 496 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 LAMA5O15230 3695 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 FAM208BQ5VWN6 2430 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 TTC3P53804 2025 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 LOXHD1Q8IVV2 1947 aa7.39□□□□□ -1.23
CTDSPL-208ENST00000486978 LAMA1P25391 3075 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 BPTFQ12830 3046 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 FRMPD4Q14CM0 1322 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 CNTNAP5Q8WYK1 1306 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 DCDC2BA2VCK2 349 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 ZBTB43O43298 467 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 EPB41L2O43491 1005 aaKnown RBP7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 LMNAP02545 664 aaKnown RBP7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 RB1P06400 928 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 CENPBP07199 599 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 MMP3P08254 477 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 HSPA4P34932 840 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 PSEN1P49768 467 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 RCAN1P53805 252 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 ARHGAP1Q07960 439 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 PTK7Q13308 1070 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 KCNV1Q6PIU1 500 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 VSIG10LQ86VR7 867 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 CMTR1Q8N1G2 835 aaKnown RBP7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 FIBCD1Q8N539 461 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 IL31RAQ8NI17 732 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 SMARCC2Q8TAQ2 1214 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 KCNG4Q8TDN1 519 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 ATP8B4Q8TF62 1192 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 SLC39A7Q92504 469 aa7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 CLP1Q92989 425 aaKnown RBP7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 EMID1Q96A84 441 aaPredicted RBP7.38□□□□□ -1.23
CTDSPL-208ENST00000486978 JAKMIP1Q96N16 626 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms