RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SCTRP47872 440 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 PPP2R2AP63151 447 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 FUKQ8N0W3 1084 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 ZBTB39O15060 712 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 PJA2O43164 708 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 PLA2G4BP0C869 781 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 SWT1Q5T5J6 900 aaKnown RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 DPP8Q6V1X1 898 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 WHAMMQ8TF30 809 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 DNAJC19Q96DA6 116 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 LUC7LQ9NQ29 371 aaKnown RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 SH3GLB2Q9NR46 395 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-211ENST00000486901 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
HSPG2-211ENST00000486901 BCL9O00512 1426 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 PGRMC1O00264 195 aaKnown RBP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 CHUKO15111 745 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 CHMP2AO43633 222 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 UCHL3P15374 230 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 CLNS1AP54105 237 aaKnown RBP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 SNCBQ16143 134 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 PRCCQ92733 491 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 AZI2Q9H6S1 392 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 NAGPAQ9UK23 515 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 USP17L10C9JJH3 530 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 MYL1P05976 194 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 CHN1P15882 459 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 GBP2P32456 591 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 PRPHP41219 470 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 USH1GQ495M9 461 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 RNF10Q8N5U6 811 aaKnown RBP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 BANK1Q8NDB2 785 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 HAS1Q92839 578 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 ISCUQ9H1K1 167 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 ACP6Q9NPH0 428 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 TAS2R14Q9NYV8 317 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 THRAP3Q9Y2W1 955 aaKnown RBP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 SSU72P8A0A1W2PR75 194 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 NEBLO76041 1014 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 KCNJ1P48048 391 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 VPS41P49754 854 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 EXOC3L4Q17RC7 722 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 ANKRD20A8PQ5CZ79 823 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 SEPT14Q6ZU15 432 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 ANKRD42Q8N9B4 389 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 PIGOQ8TEQ8 1089 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 PRMT1Q99873 361 aaKnown RBP13.5□□□□□ -0.25
HSPG2-211ENST00000486901 SH2D3AQ9BRG2 576 aa13.5□□□□□ -0.25
HSPG2-211ENST00000486901 RIMBP2O15034 1052 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 ATMINO43313 823 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 LCA5LO95447 670 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 POLD1P28340 1107 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 HSPA9P38646 679 aaKnown RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 UBXN2AP68543 259 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 MYO1EQ12965 1108 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 PRR16Q569H4 304 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 GKAP1Q5VSY0 366 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 SFR1Q86XK3 245 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 STAMBPL1Q96FJ0 436 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 MTMR9Q96QG7 549 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 CUEDC2Q9H467 287 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 IGSF9BQ9UPX0 1349 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 ZNF142P52746 1687 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 UBAP1LF5GYI3 381 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 H0YGN5 161 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 TRAPPC3O43617 180 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 MMEP08473 750 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 TRIM49P0CI25 452 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 TRIM49CP0CI26 452 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 CREB1P16220 341 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 PEX19P40855 299 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 CACNB3P54284 484 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 BYSLQ13895 437 aaKnown RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 TNIP1Q15025 636 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 GLE1Q53GS7 698 aaKnown RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 EPS8L3Q8TE67 593 aaKnown RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 POP1Q99575 1024 aaKnown RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 ARMCX3Q9UH62 379 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-211ENST00000486901 SLC12A6Q9UHW9 1150 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 NFS1Q9Y697 457 aa13.49□□□□□ -0.25
HSPG2-211ENST00000486901 A8MUI8 341 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 CETN3O15182 167 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-211ENST00000486901 MED24O75448 989 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 AKAP3O75969 853 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 AKR1B1P15121 316 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 MARCKSL1P49006 195 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-211ENST00000486901 COG2Q14746 738 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 PPP2R5AQ15172 486 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 TRIP13Q15645 432 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-211ENST00000486901 ZC2HC1CQ53FD0 456 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-211ENST00000486901 SPIRE2Q8WWL2 714 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 GCNT4Q9P109 453 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms